Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFRAP16234 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.78■□□□□ 0.92
PDGFRAP16234 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.78■□□□□ 0.92
PDGFRAP16234 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.78■□□□□ 0.92
PDGFRAP16234 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PDGFRAP16234 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFRAP16234 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.78■□□□□ 0.92
PDGFRAP16234 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.78■□□□□ 0.92
PDGFRAP16234 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFRAP16234 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFRAP16234 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFRAP16234 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDGFRAP16234 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFRAP16234 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.77■□□□□ 0.92
PDGFRAP16234 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFRAP16234 POU5F1P3-201ENST00000428824 1078 ntBASIC20.77■□□□□ 0.92
PDGFRAP16234 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.77■□□□□ 0.92
PDGFRAP16234 UNC93B5-201ENST00000530315 699 ntBASIC20.77■□□□□ 0.92
PDGFRAP16234 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFRAP16234 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFRAP16234 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFRAP16234 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDGFRAP16234 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDGFRAP16234 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 AC009237.14-201ENST00000609975 1594 ntBASIC20.76■□□□□ 0.91
PDGFRAP16234 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 ESRRAP1-201ENST00000400596 1257 ntBASIC20.76■□□□□ 0.91
PDGFRAP16234 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PDGFRAP16234 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFRAP16234 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDGFRAP16234 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFRAP16234 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PDGFRAP16234 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFRAP16234 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.75■□□□□ 0.91
PDGFRAP16234 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
PDGFRAP16234 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.75■□□□□ 0.91
PDGFRAP16234 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.75■□□□□ 0.91
PDGFRAP16234 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.75■□□□□ 0.91
PDGFRAP16234 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.75■□□□□ 0.91
PDGFRAP16234 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFRAP16234 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.75■□□□□ 0.91
PDGFRAP16234 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.75■□□□□ 0.91
PDGFRAP16234 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 AP001271.2-201ENST00000624018 1556 ntBASIC20.75■□□□□ 0.91
PDGFRAP16234 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
PDGFRAP16234 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFRAP16234 AC125437.2-201ENST00000625180 2167 ntBASIC20.75■□□□□ 0.91
PDGFRAP16234 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDGFRAP16234 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.74■□□□□ 0.91
PDGFRAP16234 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFRAP16234 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDGFRAP16234 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDGFRAP16234 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFRAP16234 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms