Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC092068.2-201ENST00000590491 1708 ntBASIC18.61■□□□□ 0.57
TPRP12270 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TPRP12270 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 RNA5SP419-201ENST00000515908 135 ntBASIC18.61■□□□□ 0.57
TPRP12270 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.61■□□□□ 0.57
TPRP12270 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.61■□□□□ 0.57
TPRP12270 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TPRP12270 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TPRP12270 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TPRP12270 AL353719.1-201ENST00000566847 864 ntBASIC18.61■□□□□ 0.57
TPRP12270 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.61■□□□□ 0.57
TPRP12270 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TPRP12270 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TPRP12270 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TPRP12270 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TPRP12270 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.6■□□□□ 0.57
TPRP12270 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TPRP12270 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.6■□□□□ 0.57
TPRP12270 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.6■□□□□ 0.57
TPRP12270 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TPRP12270 STARP1-201ENST00000397973 869 ntBASIC18.6■□□□□ 0.57
TPRP12270 MFAP1P1-201ENST00000442257 1255 ntBASIC18.6■□□□□ 0.57
TPRP12270 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
TPRP12270 KRT16P4-201ENST00000453883 522 ntBASIC18.6■□□□□ 0.57
TPRP12270 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TPRP12270 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
TPRP12270 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TPRP12270 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TPRP12270 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.59■□□□□ 0.57
TPRP12270 AC010542.4-201ENST00000563151 1910 ntBASIC18.59■□□□□ 0.57
TPRP12270 KRT18P1-202ENST00000452408 1331 ntBASIC18.59■□□□□ 0.57
TPRP12270 AC244107.1-201ENST00000442033 332 ntBASIC18.59■□□□□ 0.57
TPRP12270 HLA-J-202ENST00000469281 1241 ntBASIC18.59■□□□□ 0.57
TPRP12270 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.59■□□□□ 0.57
TPRP12270 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TPRP12270 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.59■□□□□ 0.57
TPRP12270 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TPRP12270 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TPRP12270 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.59■□□□□ 0.57
TPRP12270 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.59■□□□□ 0.57
TPRP12270 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.59■□□□□ 0.57
TPRP12270 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPRP12270 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPRP12270 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TPRP12270 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPRP12270 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPRP12270 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPRP12270 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPRP12270 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.58■□□□□ 0.57
TPRP12270 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
TPRP12270 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.58■□□□□ 0.56
TPRP12270 AP001160.2-201ENST00000596071 487 ntBASIC18.58■□□□□ 0.56
TPRP12270 AL121672.3-201ENST00000608644 468 ntBASIC18.58■□□□□ 0.56
TPRP12270 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TPRP12270 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.58■□□□□ 0.56
TPRP12270 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 AC139530.1-201ENST00000575312 1977 ntBASIC18.58■□□□□ 0.56
TPRP12270 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 PKD1P6-201ENST00000343738 4769 ntBASIC18.58■□□□□ 0.56
TPRP12270 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPRP12270 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TPRP12270 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.57■□□□□ 0.56
TPRP12270 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.57■□□□□ 0.56
TPRP12270 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.57■□□□□ 0.56
TPRP12270 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.57■□□□□ 0.56
TPRP12270 C1QL1P1-201ENST00000568105 661 ntBASIC18.57■□□□□ 0.56
TPRP12270 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms