Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC008040.2-201ENST00000461049 708 ntBASIC34.91■■■■□ 3.18
TOP2AP11388 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC34.91■■■■□ 3.18
TOP2AP11388 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
TOP2AP11388 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
TOP2AP11388 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
TOP2AP11388 BID-203ENST00000399765 1879 ntTSL 2 BASIC34.9■■■■□ 3.18
TOP2AP11388 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
TOP2AP11388 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
TOP2AP11388 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
TOP2AP11388 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC34.9■■■■□ 3.18
TOP2AP11388 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
TOP2AP11388 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC34.89■■■■□ 3.18
TOP2AP11388 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC34.89■■■■□ 3.18
TOP2AP11388 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC34.89■■■■□ 3.18
TOP2AP11388 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC34.89■■■■□ 3.18
TOP2AP11388 ATP5G1P1-201ENST00000448724 379 ntBASIC34.89■■■■□ 3.18
TOP2AP11388 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC34.89■■■■□ 3.18
TOP2AP11388 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
TOP2AP11388 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
TOP2AP11388 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
TOP2AP11388 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
TOP2AP11388 KRT16P6-202ENST00000425692 1426 ntBASIC34.88■■■■□ 3.17
TOP2AP11388 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
TOP2AP11388 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
TOP2AP11388 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
TOP2AP11388 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
TOP2AP11388 HIST1H2APS4-201ENST00000362070 348 ntBASIC34.87■■■■□ 3.17
TOP2AP11388 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC34.87■■■■□ 3.17
TOP2AP11388 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
TOP2AP11388 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC34.87■■■■□ 3.17
TOP2AP11388 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
TOP2AP11388 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC34.87■■■■□ 3.17
TOP2AP11388 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC34.87■■■■□ 3.17
TOP2AP11388 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC34.87■■■■□ 3.17
TOP2AP11388 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC34.87■■■■□ 3.17
TOP2AP11388 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
TOP2AP11388 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
TOP2AP11388 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC34.86■■■■□ 3.17
TOP2AP11388 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC34.86■■■■□ 3.17
TOP2AP11388 FP700111.2-201ENST00000619190 1892 ntBASIC34.86■■■■□ 3.17
TOP2AP11388 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
TOP2AP11388 USF2-205ENST00000594064 1179 ntTSL 2 BASIC34.86■■■■□ 3.17
TOP2AP11388 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
TOP2AP11388 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
TOP2AP11388 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
TOP2AP11388 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC34.85■■■■□ 3.17
TOP2AP11388 AC006128.1-201ENST00000624704 1661 ntBASIC34.85■■■■□ 3.17
TOP2AP11388 AC004951.3-201ENST00000418645 1148 ntBASIC34.85■■■■□ 3.17
TOP2AP11388 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC34.85■■■■□ 3.17
TOP2AP11388 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC34.85■■■■□ 3.17
TOP2AP11388 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC34.85■■■■□ 3.17
TOP2AP11388 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC34.84■■■■□ 3.17
TOP2AP11388 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC34.84■■■■□ 3.17
TOP2AP11388 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC34.84■■■■□ 3.17
TOP2AP11388 SLC25A1P4-201ENST00000567977 778 ntBASIC34.84■■■■□ 3.17
TOP2AP11388 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
TOP2AP11388 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
TOP2AP11388 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
TOP2AP11388 AC091390.4-202ENST00000476426 537 ntBASIC34.83■■■■□ 3.17
TOP2AP11388 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
TOP2AP11388 AL358472.4-201ENST00000633140 710 ntBASIC34.83■■■■□ 3.17
TOP2AP11388 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC34.83■■■■□ 3.17
TOP2AP11388 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
TOP2AP11388 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC34.82■■■■□ 3.16
TOP2AP11388 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC34.82■■■■□ 3.16
TOP2AP11388 FAM207BP-201ENST00000447172 505 ntBASIC34.82■■■■□ 3.16
TOP2AP11388 YBX1P2-201ENST00000489612 999 ntBASIC34.82■■■■□ 3.16
TOP2AP11388 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC34.82■■■■□ 3.16
TOP2AP11388 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC34.82■■■■□ 3.16
TOP2AP11388 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC34.82■■■■□ 3.16
TOP2AP11388 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC34.81■■■■□ 3.16
TOP2AP11388 AC012676.1-201ENST00000574705 1949 ntBASIC34.81■■■■□ 3.16
TOP2AP11388 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
TOP2AP11388 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
TOP2AP11388 SAPCD2P2-201ENST00000431719 1174 ntBASIC34.81■■■■□ 3.16
TOP2AP11388 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC34.81■■■■□ 3.16
TOP2AP11388 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
TOP2AP11388 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
TOP2AP11388 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
TOP2AP11388 AL031133.1-201ENST00000406807 723 ntBASIC34.81■■■■□ 3.16
TOP2AP11388 AC007663.1-201ENST00000438948 1240 ntBASIC34.81■■■■□ 3.16
TOP2AP11388 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC34.8■■■■□ 3.16
TOP2AP11388 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC34.8■■■■□ 3.16
TOP2AP11388 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC34.8■■■■□ 3.16
TOP2AP11388 NMU-205ENST00000511469 756 ntTSL 3 BASIC34.8■■■■□ 3.16
TOP2AP11388 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC34.8■■■■□ 3.16
TOP2AP11388 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC34.8■■■■□ 3.16
TOP2AP11388 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TOP2AP11388 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC34.79■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms