Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.53■■□□□ 1.2
CCNT1O60563 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CCNT1O60563 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.52■■□□□ 1.2
CCNT1O60563 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.52■■□□□ 1.2
CCNT1O60563 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CCNT1O60563 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.52■■□□□ 1.2
CCNT1O60563 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CCNT1O60563 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CCNT1O60563 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CCNT1O60563 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 AC018553.1-201ENST00000616682 1458 ntBASIC22.52■■□□□ 1.2
CCNT1O60563 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.52■■□□□ 1.2
CCNT1O60563 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.52■■□□□ 1.2
CCNT1O60563 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCNT1O60563 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.51■■□□□ 1.19
CCNT1O60563 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 KRT17P3-201ENST00000420566 1262 ntBASIC22.51■■□□□ 1.19
CCNT1O60563 POU5F1P3-201ENST00000428824 1078 ntBASIC22.51■■□□□ 1.19
CCNT1O60563 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.51■■□□□ 1.19
CCNT1O60563 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.51■■□□□ 1.19
CCNT1O60563 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.51■■□□□ 1.19
CCNT1O60563 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CCNT1O60563 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCNT1O60563 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCNT1O60563 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CCNT1O60563 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
CCNT1O60563 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.5■■□□□ 1.19
CCNT1O60563 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
CCNT1O60563 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.5■■□□□ 1.19
CCNT1O60563 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 AC006058.3-201ENST00000606217 1069 ntBASIC22.5■■□□□ 1.19
CCNT1O60563 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.5■■□□□ 1.19
CCNT1O60563 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.5■■□□□ 1.19
CCNT1O60563 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.5■■□□□ 1.19
CCNT1O60563 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 AC116351.2-201ENST00000606540 1585 ntBASIC22.5■■□□□ 1.19
CCNT1O60563 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCNT1O60563 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.49■■□□□ 1.19
CCNT1O60563 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CCNT1O60563 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.49■■□□□ 1.19
CCNT1O60563 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 AC233263.1-201ENST00000578059 224 ntBASIC22.49■■□□□ 1.19
CCNT1O60563 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.49■■□□□ 1.19
CCNT1O60563 AP001271.2-201ENST00000624018 1556 ntBASIC22.49■■□□□ 1.19
CCNT1O60563 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.49■■□□□ 1.19
CCNT1O60563 AFG3L1P-217ENST00000557444 2447 ntBASIC22.49■■□□□ 1.19
CCNT1O60563 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CCNT1O60563 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCNT1O60563 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.48■■□□□ 1.19
CCNT1O60563 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.48■■□□□ 1.19
CCNT1O60563 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 FAM201B-201ENST00000458407 597 ntBASIC22.48■■□□□ 1.19
CCNT1O60563 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.48■■□□□ 1.19
CCNT1O60563 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCNT1O60563 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCNT1O60563 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.47■■□□□ 1.19
CCNT1O60563 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.47■■□□□ 1.19
CCNT1O60563 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.47■■□□□ 1.19
CCNT1O60563 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CCNT1O60563 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.47■■□□□ 1.19
CCNT1O60563 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCNT1O60563 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms