Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
CLOCKO15516 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CLOCKO15516 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 AC245052.3-201ENST00000450182 901 ntBASIC18.76■□□□□ 0.59
CLOCKO15516 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.76■□□□□ 0.59
CLOCKO15516 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.76■□□□□ 0.59
CLOCKO15516 AC137761.2-201ENST00000561729 223 ntBASIC18.76■□□□□ 0.59
CLOCKO15516 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.76■□□□□ 0.59
CLOCKO15516 AC145350.3-201ENST00000569033 163 ntBASIC18.76■□□□□ 0.59
CLOCKO15516 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.76■□□□□ 0.59
CLOCKO15516 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.76■□□□□ 0.59
CLOCKO15516 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
CLOCKO15516 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.76■□□□□ 0.59
CLOCKO15516 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.76■□□□□ 0.59
CLOCKO15516 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLOCKO15516 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CLOCKO15516 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLOCKO15516 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLOCKO15516 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.75■□□□□ 0.59
CLOCKO15516 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLOCKO15516 AC079140.4-201ENST00000507448 529 ntBASIC18.75■□□□□ 0.59
CLOCKO15516 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.75■□□□□ 0.59
CLOCKO15516 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLOCKO15516 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CLOCKO15516 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLOCKO15516 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.74■□□□□ 0.59
CLOCKO15516 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.74■□□□□ 0.59
CLOCKO15516 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.74■□□□□ 0.59
CLOCKO15516 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLOCKO15516 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.74■□□□□ 0.59
CLOCKO15516 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.74■□□□□ 0.59
CLOCKO15516 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.74■□□□□ 0.59
CLOCKO15516 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.74■□□□□ 0.59
CLOCKO15516 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 AC004854.2-201ENST00000608450 1441 ntBASIC18.74■□□□□ 0.59
CLOCKO15516 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLOCKO15516 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 KRT87P-202ENST00000534226 1464 ntBASIC18.73■□□□□ 0.59
CLOCKO15516 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.73■□□□□ 0.59
CLOCKO15516 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLOCKO15516 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CLOCKO15516 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.73■□□□□ 0.59
CLOCKO15516 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.72■□□□□ 0.59
CLOCKO15516 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.72■□□□□ 0.59
CLOCKO15516 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLOCKO15516 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLOCKO15516 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLOCKO15516 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLOCKO15516 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLOCKO15516 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLOCKO15516 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLOCKO15516 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms