Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.87■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FAM197Y1-201ENST00000421178 764 ntBASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AL355355.2-201ENST00000442321 338 ntBASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 BX119927.1-201ENST00000636596 1552 ntBASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AL137060.1-201ENST00000618151 2648 ntBASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 CLDN5-201ENST00000403084 2357 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 NIFKP9-201ENST00000419265 221 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 KSR1P1-201ENST00000446298 240 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms