Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC024589.2-201ENST00000605642 1294 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 SNORD96A-201ENST00000606577 79 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL137246.2-201ENST00000613439 662 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC004023.1-201ENST00000561473 1744 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 PPIAP24-201ENST00000328558 471 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RNA5SP514-201ENST00000363717 111 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SNORA70.9-201ENST00000384370 135 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 FDPSP5-201ENST00000399474 1057 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RPL5P20-201ENST00000403848 896 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF37CP-201ENST00000406795 241 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RBPJP6-201ENST00000411556 1431 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RANP6-201ENST00000413691 644 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AL136455.1-201ENST00000441083 1240 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 BMS1P11-201ENST00000442351 885 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 UBE2V2P4-201ENST00000447495 259 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 BMS1P9-201ENST00000457640 885 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RPL5P14-201ENST00000494197 878 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SNORA81.2-201ENST00000516868 170 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SUMO2P19-201ENST00000518920 295 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL208P-201ENST00000577964 296 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC233702.7-202ENST00000582941 211 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AC105235.1-201ENST00000623208 1816 ntBASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RHBDD3Q9Y3P4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 TET1P1-201ENST00000426627 2301 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC119674.1-213ENST00000641177 1386 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 KYNUP2-201ENST00000582280 1329 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 SAMMSON-210ENST00000641260 1308 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms