Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC090568.1-201ENST00000509499 856 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC090115.2-201ENST00000548060 883 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 SNORA74.4-201ENST00000607595 199 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC024884.1-201ENST00000620583 399 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 FBXL21-201ENST00000297158 1305 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AL008638.3-201ENST00000623027 5182 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RNU1-49P-201ENST00000363468 159 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 LCN1P2-201ENST00000372030 223 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 SNORA51.9-201ENST00000384295 124 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 MIR130B-202ENST00000385018 82 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC004386.1-201ENST00000393214 761 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AL512593.1-201ENST00000444758 779 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RN7SL254P-201ENST00000460609 284 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC084754.1-201ENST00000463466 464 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP333-201ENST00000363466 118 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP334-201ENST00000364825 118 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC006512.2-201ENST00000543250 486 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 TPRX1P1-201ENST00000557620 319 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC020916.2-201ENST00000591242 360 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC073389.3-201ENST00000609434 935 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AC022106.1-201ENST00000612834 766 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 AP005431.1-201ENST00000618479 319 ntBASIC5.64□□□□□ -1.51
KIAA1549Q9HCM3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms