Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
COL25A1Q9BXS0 MTND5P26-201ENST00000426018 1752 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC010997.6-201ENST00000623230 1645 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 RNU6-1200P-201ENST00000384162 107 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC084880.1-201ENST00000392530 545 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 GCNT1P4-201ENST00000404096 329 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 RN7SKP58-201ENST00000411010 305 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OR4K6P-201ENST00000416478 897 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AL590103.1-201ENST00000434488 307 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC093019.1-201ENST00000443135 252 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC146507.1-201ENST00000468335 354 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC013828.1-201ENST00000481845 158 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 RPS3P7-201ENST00000488662 726 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 SCARNA18.2-201ENST00000516882 84 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AP001207.1-201ENST00000524051 481 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC004923.2-201ENST00000529649 369 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OR7E96P-201ENST00000530816 976 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC124947.2-202ENST00000552735 133 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OR11J2P-201ENST00000555298 907 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC009233.1-201ENST00000616477 371 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC009033.1-201ENST00000624279 431 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OR1S1-201ENST00000624470 978 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 FAM157B-203ENST00000639350 358 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 OR8G3P-202ENST00000641572 1255 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AP001527.1-201ENST00000566440 1957 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 AC008895.1-201ENST00000624074 2622 ntBASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
COL25A1Q9BXS0 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 AL133268.1-201ENST00000405676 1401 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
COL25A1Q9BXS0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms