Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 MAPK10-270ENST00000641102 3538 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 SNORA38B-201ENST00000363524 131 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 RNU6-650P-201ENST00000365658 111 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 DHFRP5-201ENST00000406944 564 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 RN7SKP296-201ENST00000411185 341 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC096537.2-201ENST00000413707 714 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 RPL36P18-201ENST00000419316 318 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AL451063.1-201ENST00000450164 1133 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC025181.1-201ENST00000477507 416 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 MTCYBP35-201ENST00000503630 1137 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AL117351.2-201ENST00000513571 157 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 PTS-202ENST00000524931 696 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC233266.2-201ENST00000567067 528 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 PRELID3BP3-201ENST00000584963 545 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008751.2-201ENST00000597885 980 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC110760.3-201ENST00000598794 467 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 BNIP3P32-201ENST00000600015 554 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC098935.2-201ENST00000604222 466 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 GMCL1P2-201ENST00000605230 823 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC061999.1-201ENST00000624454 177 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC106754.1-201ENST00000562632 1513 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 AC122713.2-201ENST00000624942 3335 ntBASIC7.01□□□□□ -1.29
CDK5RAP1Q96SZ6 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC217777.1-201ENST00000570034 1471 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL390862.1-201ENST00000635467 1469 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 RNA5SP308-201ENST00000362532 115 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 SNORA7A-201ENST00000384765 139 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092648.1-201ENST00000425870 423 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC074367.1-201ENST00000438685 1125 ntBASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7□□□□□ -1.29
CDK5RAP1Q96SZ6 AC004854.1-201ENST00000440356 349 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms