Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 RN7SKP118-201ENST00000364331 330 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 RN7SKP130-201ENST00000364924 301 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 U3.23-201ENST00000391132 200 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 RN7SKP271-201ENST00000410528 320 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC000089.1-201ENST00000424559 801 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AHCYP8-201ENST00000425108 209 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 RPL7AP71-201ENST00000451120 739 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC019084.1-201ENST00000457337 432 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 MTCYBP14-201ENST00000457471 715 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 SNRPCP3-201ENST00000474888 476 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC131935.1-201ENST00000524621 333 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 KCTD9P4-201ENST00000526766 1166 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 OR4A6P-201ENST00000534364 970 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC011497.2-201ENST00000600255 639 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC091193.1-201ENST00000604640 448 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC135068.11-201ENST00000636378 921 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.38□□□□□ -1.39
VMP1Q96GC9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VMP1Q96GC9 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VMP1Q96GC9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 MAPK10-379ENST00000642013 1385 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SSXP3-201ENST00000442971 1300 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 RPL9P21-201ENST00000392269 505 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 RPSAP60-201ENST00000415403 880 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 GAPDHP57-201ENST00000424400 585 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 ETF1P1-206ENST00000427296 984 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VMP1Q96GC9 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 ARAFP2-201ENST00000440565 559 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.37□□□□□ -1.39
VMP1Q96GC9 RN7SKP198-201ENST00000459286 306 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 UOX-201ENST00000471089 899 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 RPS4XP17-201ENST00000479057 754 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 RN7SL655P-201ENST00000486087 298 ntBASIC6.37□□□□□ -1.39
VMP1Q96GC9 H3F3AP3-201ENST00000497682 407 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms