Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CHMP4CQ96CF2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AL353763.1-201ENST00000624467 1628 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RNA5SP140-201ENST00000364524 92 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RNA5SP512-201ENST00000364550 120 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RNA5SP85-201ENST00000365378 119 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RN7SKP296-201ENST00000411185 341 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 SNRPBP1-201ENST00000443634 282 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 MGAT2P1-201ENST00000449718 797 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RN7SL83P-201ENST00000468131 297 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 SEPT7P6-201ENST00000469999 1143 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RN7SL836P-201ENST00000476140 296 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC025181.1-201ENST00000477507 416 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RPL29P23-201ENST00000486188 442 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RWDD4P1-201ENST00000488019 565 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 OR2A3P-201ENST00000493774 953 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC091849.1-201ENST00000509920 121 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RN7SKP5-201ENST00000517045 272 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC011270.1-201ENST00000558606 583 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 DIMT1P1-201ENST00000603970 763 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AL133445.2-201ENST00000611191 527 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 AC020923.1-201ENST00000624021 917 ntBASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.89□□□□□ -1.15
CHMP4CQ96CF2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC009120.2-204ENST00000621548 2032 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 SNORA64.3-201ENST00000365647 134 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RPS7P12-201ENST00000422385 582 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AL500527.1-201ENST00000448532 255 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC099670.1-201ENST00000455141 783 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AKR1D1P1-201ENST00000457236 936 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RBMY2HP-201ENST00000457961 720 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 SULT1D1P-201ENST00000458020 882 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC090589.1-201ENST00000473109 362 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RPL9P15-201ENST00000491096 532 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 H3F3AP3-201ENST00000497682 407 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 IGHV3-57-201ENST00000520143 280 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 IGLV3-6-201ENST00000523937 250 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC084851.2-201ENST00000530377 364 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC097467.4-201ENST00000605504 141 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 AC006213.4-201ENST00000616184 634 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 SNX18P10-201ENST00000625014 519 ntBASIC7.88□□□□□ -1.15
CHMP4CQ96CF2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms