Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 PSMC1P4-201ENST00000515236 1327 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC239868.2-201ENST00000564237 4527 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LDHAP5-201ENST00000394996 622 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 NPM1P37-201ENST00000403105 874 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RPL5P20-201ENST00000403848 896 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RN7SKP151-201ENST00000410230 316 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RN7SKP129-201ENST00000410288 299 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 YWHAZP5-201ENST00000419975 730 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RPS13P2-201ENST00000437890 455 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AL136455.1-201ENST00000441083 1240 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 VPS25P1-201ENST00000455691 508 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 SNRPCP3-201ENST00000474888 476 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC093815.1-201ENST00000508637 280 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 SCARNA5-201ENST00000516201 276 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 IGKV2-19-201ENST00000518132 283 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 COX6B1P4-201ENST00000519826 484 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AP001646.2-201ENST00000528645 1156 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 OR4C1P-201ENST00000530880 937 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 ADAM3B-201ENST00000569937 840 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 MIR4428-201ENST00000584884 73 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 GLYATL1P2-202ENST00000588046 902 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AL592504.1-201ENST00000605319 439 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC083964.1-201ENST00000607549 630 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC005753.1-201ENST00000623837 618 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 OR7E91P-202ENST00000642062 1198 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC097063.1-201ENST00000426714 1797 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC125238.2-201ENST00000430003 1440 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC114876.1-201ENST00000490962 1366 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 TRIM53CP-201ENST00000531490 1354 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71LQ8N9Z2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 SNORD1C-201ENST00000363315 78 ntBASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 MIR433-201ENST00000384837 93 ntBASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 RNU1-56P-201ENST00000391303 164 ntBASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC71LQ8N9Z2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms