Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 RNU1-150P-201ENST00000362491 162 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AC015977.1-201ENST00000418887 292 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 RPL6P30-201ENST00000443382 862 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 CST12P-201ENST00000457644 362 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 TRIM77BP-201ENST00000524985 1119 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AC079905.1-201ENST00000549280 475 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AC090826.1-203ENST00000569235 490 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AL357562.1-201ENST00000624911 609 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AL354890.1-201ENST00000413730 346 ntBASIC9.66□□□□□ -0.86
VPS8Q8N3P4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AC066692.1-201ENST00000421721 457 ntBASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 SCARNA18.1-201ENST00000516330 83 ntBASIC9.66□□□□□ -0.86
VPS8Q8N3P4 RN7SKP238-201ENST00000516483 249 ntBASIC9.66□□□□□ -0.86
VPS8Q8N3P4 MED21-206ENST00000546323 575 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 AC093225.1-201ENST00000506867 1408 ntBASIC9.66□□□□□ -0.86
VPS8Q8N3P4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS8Q8N3P4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 RNA5SP477-201ENST00000362639 119 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 MIR1282-201ENST00000408865 101 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 RPS15AP30-201ENST00000420976 390 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AC073594.1-201ENST00000462065 364 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AP005119.1-201ENST00000580956 292 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AC137695.1-201ENST00000604126 489 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AL136228.1-201ENST00000622221 319 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 LYARP1-201ENST00000436977 1501 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 MTCO1P28-201ENST00000574177 1528 ntBASIC9.65□□□□□ -0.86
VPS8Q8N3P4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS8Q8N3P4 AC022819.1-201ENST00000563495 3910 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.65□□□□□ -0.87
VPS8Q8N3P4 RNA5SP273-201ENST00000362484 113 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 RNU1-134P-201ENST00000362935 165 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 CRP-204ENST00000368112 787 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS8Q8N3P4 LCN1P2-201ENST00000372030 223 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC245096.1-201ENST00000413104 546 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS8Q8N3P4 RPL35AP31-201ENST00000418340 337 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 SEPT14P12-201ENST00000442280 560 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC9.65□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms