Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 STAG3L4-201ENST00000352103 530 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RNA5SP308-201ENST00000362532 115 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RPL23AP85-201ENST00000421838 433 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AL672212.1-201ENST00000422246 400 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RPS10P14-201ENST00000440748 502 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 CCNJP1-201ENST00000450600 1149 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AKR1D1P1-201ENST00000457236 936 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RN7SL790P-201ENST00000474043 298 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 MINOS1P4-201ENST00000515470 318 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 IGLV3-6-201ENST00000523937 250 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC005899.7-201ENST00000618199 588 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 AC012254.5-201ENST00000623573 478 ntBASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NHLRC1Q6VVB1 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NHLRC1Q6VVB1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NHLRC1Q6VVB1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 U3.52-201ENST00000384034 216 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC019178.1-201ENST00000392337 440 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC098592.2-201ENST00000413158 265 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC096644.3-201ENST00000416788 338 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC097721.1-201ENST00000427150 1253 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AL596268.1-201ENST00000427910 1048 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 Z68868.1-201ENST00000429048 544 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 MED28P4-201ENST00000433137 572 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC005017.1-201ENST00000482002 490 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 NPM1P52-201ENST00000518264 846 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC008429.2-201ENST00000523057 864 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC008126.1-201ENST00000549019 480 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC091193.1-201ENST00000604640 448 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 U91328.4-201ENST00000608919 517 ntBASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.83□□□□□ -1.48
NHLRC1Q6VVB1 AC011455.2-201ENST00000599320 3336 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms