Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AL451142.1-201ENST00000375867 775 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 MIR433-201ENST00000384837 93 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 MIR551B-201ENST00000384984 96 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 RNU11-6P-201ENST00000391127 133 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 RNA5SP251-201ENST00000410614 137 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 GTF2IP14-201ENST00000441415 586 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 MRPL57P6-201ENST00000506570 309 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 MRPS5P3-201ENST00000515577 166 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AC023968.1-201ENST00000560719 475 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 SMG1P5-202ENST00000529428 4219 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 SMG1P2-201ENST00000566127 4221 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 AC005725.1-201ENST00000577346 2607 ntBASIC6.07□□□□□ -1.44
HMGCS1Q01581 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS1Q01581 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS1Q01581 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 OR11H13P-201ENST00000359695 979 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 RPEP4-201ENST00000437636 602 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 GAPDHP37-201ENST00000442317 968 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 AL445991.1-201ENST00000450381 475 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 CEACAMP11-201ENST00000455211 583 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 RN7SL413P-201ENST00000482700 297 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 RN7SL714P-201ENST00000487050 298 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 RN7SL66P-201ENST00000582099 264 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC006924.1-201ENST00000610750 559 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 MIR6503-201ENST00000622884 86 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 AC099654.15-201ENST00000639802 509 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGCS1Q01581 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 USP9YP3-201ENST00000434481 1766 ntBASIC6.06□□□□□ -1.44
HMGCS1Q01581 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS1Q01581 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 SSXP3-201ENST00000442971 1300 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL445238.1-204ENST00000400311 463 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms