Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC016908.1-201ENST00000442571 1219 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC079922.1-201ENST00000443291 359 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC092601.1-201ENST00000444526 383 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.18□□□□□ -1.42
CDKN2DP55273 RN7SL39P-201ENST00000462264 297 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 RPL12P31-201ENST00000478433 450 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKN2DP55273 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.18□□□□□ -1.42
CDKN2DP55273 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 AC092865.1-201ENST00000544395 1023 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKN2DP55273 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.18□□□□□ -1.42
CDKN2DP55273 CCDC58P1-201ENST00000578567 430 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 MIR212-201ENST00000586026 110 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.18□□□□□ -1.42
CDKN2DP55273 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 GAPDHP41-201ENST00000613707 975 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.18□□□□□ -1.42
CDKN2DP55273 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
CDKN2DP55273 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKN2DP55273 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKN2DP55273 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKN2DP55273 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKN2DP55273 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKN2DP55273 AC093829.1-201ENST00000506662 1618 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC079753.1-201ENST00000623243 3868 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKN2DP55273 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDKN2DP55273 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 RN7SKP121-201ENST00000410842 305 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC112492.2-201ENST00000432774 1030 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 EMC3-AS1-205ENST00000438698 534 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 OR2L9P-201ENST00000444456 913 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC115223.1-201ENST00000466377 870 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 SLC25A51P1-201ENST00000468432 871 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 RPS4XP17-201ENST00000479057 754 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKN2DP55273 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC090651.1-201ENST00000567865 634 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC063977.7-201ENST00000594454 337 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC022001.1-201ENST00000605193 268 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CDKN2DP55273 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDKN2DP55273 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKN2DP55273 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 AC005225.5-201ENST00000623547 2225 ntBASIC6.17□□□□□ -1.42
CDKN2DP55273 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKN2DP55273 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CDKN2DP55273 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDKN2DP55273 AC007114.2-201ENST00000576014 4281 ntBASIC6.16□□□□□ -1.42
CDKN2DP55273 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.16□□□□□ -1.42
CDKN2DP55273 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKN2DP55273 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKN2DP55273 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDKN2DP55273 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKN2DP55273 SNORA43.1-201ENST00000364863 140 ntBASIC6.16□□□□□ -1.42
CDKN2DP55273 RNA5SP77-201ENST00000365394 120 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms