Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.93□□□□□ -1.3
NEK3P51956 AC011352.2-201ENST00000514574 1016 ntBASIC6.93□□□□□ -1.3
NEK3P51956 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.93□□□□□ -1.3
NEK3P51956 SNORA26.10-201ENST00000516427 141 ntBASIC6.93□□□□□ -1.3
NEK3P51956 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.93□□□□□ -1.3
NEK3P51956 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.93□□□□□ -1.3
NEK3P51956 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.93□□□□□ -1.3
NEK3P51956 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.93□□□□□ -1.3
NEK3P51956 MIR4301-201ENST00000577203 66 ntBASIC6.93□□□□□ -1.3
NEK3P51956 MIR3908-201ENST00000579798 126 ntBASIC6.93□□□□□ -1.3
NEK3P51956 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 DIMT1P1-201ENST00000603970 763 ntBASIC6.93□□□□□ -1.3
NEK3P51956 AL133370.2-201ENST00000619934 439 ntBASIC6.93□□□□□ -1.3
NEK3P51956 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.93□□□□□ -1.3
NEK3P51956 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 MTND5P23-201ENST00000430812 1655 ntBASIC6.93□□□□□ -1.3
NEK3P51956 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NEK3P51956 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 AC093278.2-201ENST00000564956 2485 ntBASIC6.92□□□□□ -1.3
NEK3P51956 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 AL512329.1-201ENST00000404600 1592 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 OR56A4-201ENST00000330728 1209 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC107977.1-201ENST00000355745 939 ntBASIC6.92□□□□□ -1.3
NEK3P51956 RN7SKP47-201ENST00000365347 328 ntBASIC6.92□□□□□ -1.3
NEK3P51956 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NEK3P51956 GLUD1P9-201ENST00000420997 1173 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.92□□□□□ -1.3
NEK3P51956 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 ETF1P1-206ENST00000427296 984 ntBASIC6.92□□□□□ -1.3
NEK3P51956 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.92□□□□□ -1.3
NEK3P51956 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.92□□□□□ -1.3
NEK3P51956 AC083855.1-201ENST00000440041 258 ntBASIC6.92□□□□□ -1.3
NEK3P51956 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 AC022080.2-201ENST00000452932 533 ntBASIC6.92□□□□□ -1.3
NEK3P51956 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.92□□□□□ -1.3
NEK3P51956 RN7SL216P-201ENST00000471607 298 ntBASIC6.92□□□□□ -1.3
NEK3P51956 RN7SL502P-201ENST00000481857 290 ntBASIC6.92□□□□□ -1.3
NEK3P51956 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 HMGB1P47-201ENST00000511281 589 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC139713.1-202ENST00000512366 460 ntBASIC6.92□□□□□ -1.3
NEK3P51956 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.92□□□□□ -1.3
NEK3P51956 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.92□□□□□ -1.3
NEK3P51956 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 AC092868.3-201ENST00000560515 784 ntBASIC6.92□□□□□ -1.3
NEK3P51956 MTND4LP25-201ENST00000570218 163 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.92□□□□□ -1.3
NEK3P51956 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.92□□□□□ -1.3
NEK3P51956 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.92□□□□□ -1.3
NEK3P51956 AL133247.2-201ENST00000603236 482 ntBASIC6.92□□□□□ -1.3
NEK3P51956 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NEK3P51956 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 AC005618.1-201ENST00000606901 3148 ntBASIC6.92□□□□□ -1.3
NEK3P51956 AC105749.1-201ENST00000631338 2008 ntBASIC6.92□□□□□ -1.3
NEK3P51956 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.92□□□□□ -1.3
NEK3P51956 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NEK3P51956 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 AC013488.1-201ENST00000526618 1838 ntBASIC6.92□□□□□ -1.3
NEK3P51956 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
NEK3P51956 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
NEK3P51956 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.91□□□□□ -1.3
NEK3P51956 AC092701.1-201ENST00000623627 1551 ntBASIC6.91□□□□□ -1.3
NEK3P51956 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 AL591848.4-201ENST00000567832 3472 ntBASIC6.91□□□□□ -1.3
NEK3P51956 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NEK3P51956 CUBNP3-201ENST00000457461 1784 ntBASIC6.91□□□□□ -1.3
NEK3P51956 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.91□□□□□ -1.3
NEK3P51956 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NEK3P51956 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.91□□□□□ -1.3
NEK3P51956 AL353133.1-201ENST00000407695 401 ntBASIC6.91□□□□□ -1.3
NEK3P51956 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.91□□□□□ -1.3
NEK3P51956 AC006509.1-201ENST00000420788 634 ntBASIC6.91□□□□□ -1.3
NEK3P51956 PRUNEP1-201ENST00000425846 705 ntBASIC6.91□□□□□ -1.3
NEK3P51956 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.91□□□□□ -1.3
NEK3P51956 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms