Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 BMP6P1-201ENST00000431230 679 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.73□□□□□ -1.33
APOEP02649 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 RN7SL39P-201ENST00000462264 297 ntBASIC6.73□□□□□ -1.33
APOEP02649 RN7SL836P-201ENST00000476140 296 ntBASIC6.73□□□□□ -1.33
APOEP02649 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.73□□□□□ -1.33
APOEP02649 AC092349.1-201ENST00000504903 310 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC018645.1-201ENST00000505003 109 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC091965.3-201ENST00000506236 208 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.73□□□□□ -1.33
APOEP02649 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.73□□□□□ -1.33
APOEP02649 AC012368.3-201ENST00000604190 219 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC012254.5-201ENST00000623573 478 ntBASIC6.73□□□□□ -1.33
APOEP02649 LINC02495-203ENST00000636704 242 ntBASIC6.73□□□□□ -1.33
APOEP02649 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 AKAP17BP-201ENST00000431706 2719 ntBASIC6.73□□□□□ -1.33
APOEP02649 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.73□□□□□ -1.33
APOEP02649 RPL31P11-201ENST00000426558 1558 ntBASIC6.73□□□□□ -1.33
APOEP02649 AC073365.1-203ENST00000641055 1992 ntBASIC6.73□□□□□ -1.33
APOEP02649 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
APOEP02649 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
APOEP02649 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.73□□□□□ -1.33
APOEP02649 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
APOEP02649 AC006213.6-201ENST00000623722 4179 ntBASIC6.72□□□□□ -1.33
APOEP02649 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.72□□□□□ -1.33
APOEP02649 AC010624.4-201ENST00000597606 1351 ntBASIC6.72□□□□□ -1.33
APOEP02649 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 NCOA4P2-201ENST00000340589 1813 ntBASIC6.72□□□□□ -1.33
APOEP02649 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 RNA5SP514-201ENST00000363717 111 ntBASIC6.72□□□□□ -1.33
APOEP02649 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.72□□□□□ -1.33
APOEP02649 AL139184.1-202ENST00000422303 222 ntBASIC6.72□□□□□ -1.33
APOEP02649 CYCSP52-201ENST00000422857 310 ntBASIC6.72□□□□□ -1.33
APOEP02649 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 LINC00328-2P-201ENST00000436585 219 ntBASIC6.72□□□□□ -1.33
APOEP02649 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.72□□□□□ -1.33
APOEP02649 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.72□□□□□ -1.33
APOEP02649 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.72□□□□□ -1.33
APOEP02649 RPL29P23-201ENST00000486188 442 ntBASIC6.72□□□□□ -1.33
APOEP02649 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.72□□□□□ -1.33
APOEP02649 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 AP003080.1-202ENST00000526526 915 ntBASIC6.72□□□□□ -1.33
APOEP02649 AC135983.3-201ENST00000528049 1226 ntBASIC6.72□□□□□ -1.33
APOEP02649 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 RPL41P2-201ENST00000544920 409 ntBASIC6.72□□□□□ -1.33
APOEP02649 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 AC011891.2-201ENST00000604949 397 ntBASIC6.72□□□□□ -1.33
APOEP02649 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
APOEP02649 AL117378.2-201ENST00000622916 1337 ntBASIC6.72□□□□□ -1.33
APOEP02649 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.72□□□□□ -1.33
APOEP02649 SAGE3P-201ENST00000619800 1635 ntBASIC6.72□□□□□ -1.33
APOEP02649 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
APOEP02649 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
APOEP02649 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
APOEP02649 AC007159.1-201ENST00000566529 4706 ntBASIC6.71□□□□□ -1.33
APOEP02649 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
APOEP02649 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
APOEP02649 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
APOEP02649 YWHAZP4-201ENST00000392459 708 ntBASIC6.71□□□□□ -1.34
APOEP02649 AL050335.1-201ENST00000396909 869 ntBASIC6.71□□□□□ -1.34
APOEP02649 RPL7AP51-201ENST00000422016 760 ntBASIC6.71□□□□□ -1.34
APOEP02649 GTF3AP6-201ENST00000432585 986 ntBASIC6.71□□□□□ -1.34
APOEP02649 MGAT2P1-201ENST00000449718 797 ntBASIC6.71□□□□□ -1.34
APOEP02649 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.71□□□□□ -1.34
APOEP02649 AP001000.1-201ENST00000526843 742 ntBASIC6.71□□□□□ -1.34
APOEP02649 AL133399.1-201ENST00000527476 298 ntBASIC6.71□□□□□ -1.34
APOEP02649 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.71□□□□□ -1.34
APOEP02649 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.71□□□□□ -1.34
APOEP02649 MT1CP-201ENST00000567054 174 ntBASIC6.71□□□□□ -1.34
APOEP02649 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 AL589765.6-201ENST00000601909 549 ntBASIC6.71□□□□□ -1.34
APOEP02649 AL132640.3-201ENST00000630473 177 ntBASIC6.71□□□□□ -1.34
APOEP02649 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
APOEP02649 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.71□□□□□ -1.34
APOEP02649 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms