Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC006213.6-201ENST00000623722 4179 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 RN7SKP237-201ENST00000364663 301 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 GCNT1P4-201ENST00000404096 329 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 RPL6P21-201ENST00000418672 846 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC073916.1-201ENST00000545095 130 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC090888.3-201ENST00000558917 509 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 MIR4502-201ENST00000580432 81 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC011497.2-201ENST00000600255 639 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC097641.3-201ENST00000613523 464 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AL132640.3-201ENST00000630473 177 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AC073488.6-201ENST00000632293 754 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 AL357140.4-201ENST00000636827 412 ntBASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
HMG20BQ9P0W2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 RPS7P14-201ENST00000426405 583 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 GAPDHP34-201ENST00000432112 823 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 SOCS5P1-201ENST00000440415 949 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 VN1R38P-201ENST00000450265 887 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 OR4D12P-201ENST00000509361 911 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 RN7SKP70-201ENST00000516655 271 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 COX6B1P4-201ENST00000519826 484 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 NPIPB14P-203ENST00000532298 987 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC233702.7-202ENST00000582941 211 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AC137695.1-201ENST00000604126 489 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AL080312.2-201ENST00000613001 630 ntBASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HMG20BQ9P0W2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HMG20BQ9P0W2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms