Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 OR4K17-201ENST00000315543 1032 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC023886.2-201ENST00000321285 411 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 MIR122-201ENST00000385044 85 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AL359885.1-201ENST00000415786 903 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC002069.1-201ENST00000429649 1159 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 BMP6P1-201ENST00000431230 679 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 FTLP17-201ENST00000432567 525 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 SULT1D1P-201ENST00000458020 882 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 BX323845.2-201ENST00000458382 234 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC005165.2-201ENST00000466070 380 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RPS4XP17-201ENST00000479057 754 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL379P-201ENST00000479912 293 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RNA5SP518-201ENST00000515957 119 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RNU6-1102P-201ENST00000516149 96 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RN7SKP5-201ENST00000517045 272 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 OR5M6P-201ENST00000530227 937 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC074029.2-201ENST00000551045 634 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 MTND1P24-201ENST00000552175 861 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 BNIP3P38-201ENST00000601117 544 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC091193.1-201ENST00000604640 448 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AL161931.1-201ENST00000612768 246 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL126P-201ENST00000616400 299 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AL354718.1-201ENST00000619764 589 ntBASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AMBRA1Q9C0C7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 CCNT2P1-201ENST00000423082 1315 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 STAG3L4-201ENST00000352103 530 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC007618.1-201ENST00000366455 732 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 RNU6-1000P-201ENST00000391066 106 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 FAUP2-201ENST00000394301 401 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC096537.2-201ENST00000413707 714 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 PPIAP23-201ENST00000420099 497 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 RCC2P2-201ENST00000422174 918 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 OR52S1P-201ENST00000427016 937 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC114973.1-201ENST00000429057 632 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 CRYGGP-201ENST00000443337 145 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL149P-201ENST00000465197 281 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 MYL6P4-201ENST00000477911 453 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AL591122.1-201ENST00000487348 492 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 RPL17P2-201ENST00000491913 451 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 MTCO2P9-201ENST00000503214 694 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 SNORA58-201ENST00000505219 137 ntBASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.32□□□□□ -1.4
AMBRA1Q9C0C7 AC007537.1-201ENST00000539347 327 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms