Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC068870.2-201ENST00000620635 389 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC087565.3-203ENST00000641018 837 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 MED28P4-201ENST00000433137 572 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 EEF1B2P6-201ENST00000445713 673 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 HMGN2P6-201ENST00000551091 273 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC013391.3-201ENST00000567484 1456 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AL359396.1-201ENST00000623151 2376 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AL109941.1-201ENST00000401925 229 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 GSTP1P1-201ENST00000548078 319 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AC018552.1-201ENST00000562099 811 ntBASIC6.18□□□□□ -1.42
RIF1Q5UIP0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIF1Q5UIP0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AP002833.3-201ENST00000625075 2265 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AL590762.4-201ENST00000425885 253 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 PSMD10P3-201ENST00000437000 448 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 RN7SL705P-201ENST00000481678 294 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AL691477.1-201ENST00000624398 162 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AL033543.1-201ENST00000623440 13454 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 HCG18-244ENST00000602516 2890 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 CFL1P1-202ENST00000432948 411 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 OR3D1P-201ENST00000438288 955 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 MTCYBP21-201ENST00000443300 1113 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC004232.1-201ENST00000571388 208 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 321.1 ms