Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC005261.6-201ENST00000623072 1387 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 DOCK11P1-201ENST00000553480 5932 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 AL512353.3-201ENST00000417517 1326 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 RNA5SP355-201ENST00000365317 135 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 RNU6-152P-201ENST00000384037 107 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 UBBP1-201ENST00000392399 473 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AL358178.1-201ENST00000407698 397 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 EEF1B2P8-201ENST00000414101 671 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC012497.1-201ENST00000429392 575 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 MRPS21P3-201ENST00000436696 262 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 SNRPBP1-201ENST00000443634 282 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.34□□□□□ -1.55
CX3CL1P78423 RPL7AP23-201ENST00000482625 776 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC091849.1-201ENST00000509920 121 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC010442.1-201ENST00000515583 816 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 SETP17-201ENST00000534163 817 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC089984.3-201ENST00000552838 363 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AL109628.1-201ENST00000556877 366 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CL1P78423 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.34□□□□□ -1.55
CX3CL1P78423 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 AL354718.1-201ENST00000619764 589 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AL162233.1-201ENST00000620014 944 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AC006328.2-201ENST00000623198 397 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 AC012005.2-201ENST00000624333 397 ntBASIC5.34□□□□□ -1.55
CX3CL1P78423 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CL1P78423 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CL1P78423 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.34□□□□□ -1.56
CX3CL1P78423 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.34□□□□□ -1.56
CX3CL1P78423 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CL1P78423 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.34□□□□□ -1.56
CX3CL1P78423 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CL1P78423 ZNF101P1-201ENST00000435701 1720 ntBASIC5.34□□□□□ -1.56
CX3CL1P78423 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.34□□□□□ -1.56
CX3CL1P78423 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.34□□□□□ -1.56
CX3CL1P78423 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.34□□□□□ -1.56
CX3CL1P78423 AP002370.1-201ENST00000528055 1602 ntBASIC5.34□□□□□ -1.56
CX3CL1P78423 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CL1P78423 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 TNPO1P2-201ENST00000426249 2665 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CX3CL1P78423 RNA5SP442-201ENST00000365050 107 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 SNORA70.9-201ENST00000384370 135 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AL672212.1-201ENST00000422246 400 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 CR848007.2-201ENST00000424918 787 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 MTCO3P43-201ENST00000440974 771 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 GAPDHP20-201ENST00000444107 1007 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 PFN1P11-201ENST00000445829 389 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AL049829.1-201ENST00000465411 156 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AL079303.1-201ENST00000486611 463 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC093878.1-201ENST00000515630 432 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 AC009879.1-201ENST00000520029 839 ntBASIC5.33□□□□□ -1.56
CX3CL1P78423 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CL1P78423 AC091304.4-201ENST00000565703 620 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms