Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.71□□□□□ -1.18
RHBDL3P58872 MIR541-201ENST00000401360 84 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.71□□□□□ -1.18
RHBDL3P58872 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC7.71□□□□□ -1.18
RHBDL3P58872 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.71□□□□□ -1.18
RHBDL3P58872 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.71□□□□□ -1.18
RHBDL3P58872 CXCR2P1-202ENST00000443392 1074 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 RPL5P7-201ENST00000444235 813 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 HMGN1P2-201ENST00000445197 310 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 RBMY3AP-201ENST00000449381 1145 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 AL358876.1-201ENST00000453364 1075 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.71□□□□□ -1.18
RHBDL3P58872 RPL12P31-201ENST00000478433 450 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.71□□□□□ -1.18
RHBDL3P58872 IGHV3-57-201ENST00000520143 280 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.71□□□□□ -1.18
RHBDL3P58872 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 QTRT1P1-201ENST00000604344 1078 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 AL590410.1-201ENST00000617925 333 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 AC073488.6-201ENST00000632293 754 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
RHBDL3P58872 NEK2P2-201ENST00000438441 1338 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 AC140479.2-201ENST00000421567 3130 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 AC130360.2-201ENST00000533477 1556 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RHBDL3P58872 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 CLCA3P-203ENST00000490028 2781 ntBASIC7.71□□□□□ -1.18
RHBDL3P58872 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.71□□□□□ -1.18
RHBDL3P58872 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RHBDL3P58872 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RHBDL3P58872 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.7□□□□□ -1.18
RHBDL3P58872 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.7□□□□□ -1.18
RHBDL3P58872 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.7□□□□□ -1.18
RHBDL3P58872 AL354707.3-201ENST00000427308 331 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 Z68868.1-201ENST00000429048 544 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AC079807.1-201ENST00000429993 481 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.7□□□□□ -1.18
RHBDL3P58872 EMC3-AS1-205ENST00000438698 534 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 RPS10P18-201ENST00000442662 495 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 SNX18P25-201ENST00000510539 758 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.7□□□□□ -1.18
RHBDL3P58872 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.7□□□□□ -1.18
RHBDL3P58872 AC025171.4-201ENST00000607250 1047 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 OR7M1P-201ENST00000608946 533 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AL080312.2-201ENST00000613001 630 ntBASIC7.7□□□□□ -1.18
RHBDL3P58872 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.7□□□□□ -1.18
RHBDL3P58872 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.7□□□□□ -1.18
RHBDL3P58872 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
RHBDL3P58872 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RHBDL3P58872 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.69□□□□□ -1.18
RHBDL3P58872 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AL139384.2-201ENST00000613809 3590 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 RNU6-697P-201ENST00000363348 107 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 RNA5SP433-201ENST00000364491 114 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.69□□□□□ -1.18
RHBDL3P58872 XKRYP6-201ENST00000440468 1116 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 XKRYP3-201ENST00000442113 1116 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 HMGB1P7-201ENST00000450921 612 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 RN7SL254P-201ENST00000460609 284 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms