Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CLRN1P58418 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CLRN1P58418 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.21□□□□□ -1.41
CLRN1P58418 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CLRN1P58418 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 AL080312.1-201ENST00000256654 824 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 SNORD116-2-201ENST00000384274 95 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 SNORD116-6-201ENST00000384711 96 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 GAPDHP15-201ENST00000398586 975 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 RN7SKP30-201ENST00000411373 334 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 DHFRP2-201ENST00000414224 547 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.21□□□□□ -1.42
CLRN1P58418 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 GRPEL2P2-201ENST00000421856 670 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC008753.1-201ENST00000423096 284 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 MYO5BP3-201ENST00000431872 1279 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 RPL7P34-201ENST00000433316 712 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 LSM3P3-201ENST00000436601 306 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 RAB28P3-201ENST00000448325 597 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC010878.1-201ENST00000456500 1047 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 PSMA6P2-201ENST00000457574 686 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.21□□□□□ -1.42
CLRN1P58418 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AP001803.1-201ENST00000525668 147 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 OR4C1P-201ENST00000530880 937 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.21□□□□□ -1.42
CLRN1P58418 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 OOSP1P2-201ENST00000579644 351 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AC124283.4-201ENST00000581815 456 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.21□□□□□ -1.42
CLRN1P58418 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 SNX6P1-201ENST00000601728 1224 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC113368.1-201ENST00000603736 382 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC002487.1-201ENST00000604565 994 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC099785.1-201ENST00000605697 437 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC012213.4-201ENST00000606457 354 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AL161420.1-201ENST00000619393 264 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 AC018558.4-201ENST00000622153 281 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.21□□□□□ -1.42
CLRN1P58418 AP002967.1-201ENST00000624203 539 ntBASIC6.21□□□□□ -1.42
CLRN1P58418 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
CLRN1P58418 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLRN1P58418 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.2□□□□□ -1.42
CLRN1P58418 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CLRN1P58418 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLRN1P58418 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLRN1P58418 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLRN1P58418 RNU5B-4P-201ENST00000363508 111 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 RNU12-2P-201ENST00000364789 156 ntBASIC6.2□□□□□ -1.42
CLRN1P58418 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.2□□□□□ -1.42
CLRN1P58418 RNA5SP53-201ENST00000391299 120 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms