Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC022730.1-201ENST00000473114 568 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC092824.1-201ENST00000483524 576 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 CHEK2P2-201ENST00000554701 672 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL078623.1-201ENST00000602702 907 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AC022001.1-201ENST00000605193 268 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC012254.5-201ENST00000623573 478 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 TMCC1P1-201ENST00000518897 1980 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 RBPJP6-201ENST00000411556 1431 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 AC092111.2-201ENST00000611627 1414 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 PSMC1P4-201ENST00000515236 1327 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HNF4AP41235 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HNF4AP41235 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HNF4AP41235 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 TRGV7-201ENST00000427089 353 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 UBBP5-201ENST00000446970 266 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.35□□□□□ -1.39
HNF4AP41235 RPS3AP49-201ENST00000472161 790 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 AC135626.1-201ENST00000556983 435 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 OR4C49P-201ENST00000563891 900 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 AC027796.1-201ENST00000575593 512 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
HNF4AP41235 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.35□□□□□ -1.39
HNF4AP41235 AL121936.2-201ENST00000641935 662 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 OLMALINC-203ENST00000641087 3779 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 AL662795.2-201ENST00000624252 3706 ntBASIC6.35□□□□□ -1.39
HNF4AP41235 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HNF4AP41235 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 AC067942.1-201ENST00000488045 1493 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.34□□□□□ -1.39
HNF4AP41235 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HNF4AP41235 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HNF4AP41235 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.34□□□□□ -1.39
HNF4AP41235 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HNF4AP41235 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.34□□□□□ -1.39
HNF4AP41235 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HNF4AP41235 STAG3L4-201ENST00000352103 530 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms