Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.06□□□□□ -1.12
COL15A1P39059 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.06□□□□□ -1.12
COL15A1P39059 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 AC087752.1-201ENST00000391360 558 ntBASIC8.06□□□□□ -1.12
COL15A1P39059 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.06□□□□□ -1.12
COL15A1P39059 RN7SKP144-201ENST00000411108 279 ntBASIC8.06□□□□□ -1.12
COL15A1P39059 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.06□□□□□ -1.12
COL15A1P39059 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.06□□□□□ -1.12
COL15A1P39059 AC026254.2-201ENST00000475295 371 ntBASIC8.06□□□□□ -1.12
COL15A1P39059 RPL34P33-201ENST00000486062 334 ntBASIC8.06□□□□□ -1.12
COL15A1P39059 PSMA2P2-201ENST00000504319 686 ntBASIC8.06□□□□□ -1.12
COL15A1P39059 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.06□□□□□ -1.12
COL15A1P39059 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.06□□□□□ -1.12
COL15A1P39059 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL15A1P39059 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 AP003175.1-201ENST00000641383 6658 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.05□□□□□ -1.12
COL15A1P39059 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
COL15A1P39059 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 AL050335.1-201ENST00000396909 869 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.05□□□□□ -1.12
COL15A1P39059 AC079355.1-201ENST00000421770 223 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 RN7SL326P-201ENST00000477493 296 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 Y_RNA.667-201ENST00000516212 107 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 AC084337.1-201ENST00000524809 686 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 AL121579.2-201ENST00000555466 590 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC8.05□□□□□ -1.12
COL15A1P39059 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.05□□□□□ -1.12
COL15A1P39059 NPIPB1P-202ENST00000588786 828 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 RFPL4AP6-201ENST00000616792 846 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.05□□□□□ -1.12
COL15A1P39059 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.05□□□□□ -1.12
COL15A1P39059 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.05□□□□□ -1.12
COL15A1P39059 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL15A1P39059 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
COL15A1P39059 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
COL15A1P39059 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 YY1P1-201ENST00000427625 668 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 VPS25P1-201ENST00000455691 508 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 RNA5SP271-201ENST00000516700 88 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 AC022616.2-201ENST00000523185 300 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.04□□□□□ -1.12
COL15A1P39059 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.04□□□□□ -1.12
COL15A1P39059 AC090616.1-201ENST00000583895 447 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.04□□□□□ -1.12
COL15A1P39059 AL591167.1-201ENST00000607321 456 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.04□□□□□ -1.12
COL15A1P39059 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC8.04□□□□□ -1.12
COL15A1P39059 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
COL15A1P39059 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL15A1P39059 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL15A1P39059 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.03□□□□□ -1.12
COL15A1P39059 CYP2G2P-201ENST00000594920 1485 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 SYT14P1-202ENST00000600441 1448 ntBASIC8.03□□□□□ -1.12
COL15A1P39059 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
COL15A1P39059 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.03□□□□□ -1.12
COL15A1P39059 Z68694.1-201ENST00000413929 841 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms