Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR10AB1P-202ENST00000641219 1686 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AL445523.1-201ENST00000451184 1362 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.95□□□□□ -1.3
COL6A2P12110 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 RPL9P21-201ENST00000392269 505 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 RPL22P18-201ENST00000417197 377 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL6A2P12110 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 AL604028.2-201ENST00000437848 788 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 ARF4P4-201ENST00000439608 520 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.95□□□□□ -1.3
COL6A2P12110 PMS2P9-201ENST00000441237 515 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 VN1R25P-201ENST00000443385 738 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 RPL23AP23-201ENST00000452590 471 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.95□□□□□ -1.3
COL6A2P12110 MTND4LP2-201ENST00000502312 285 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 OR5D2P-201ENST00000524390 911 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 OR7E1P-201ENST00000533891 958 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC018523.1-201ENST00000534211 512 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 EGLN3P1-201ENST00000541727 720 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 UBE2CP4-201ENST00000561405 535 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC018558.5-201ENST00000565840 952 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 MTCYBP28-201ENST00000566728 1132 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 ACTG1P15-201ENST00000570019 1063 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC012065.3-201ENST00000602736 439 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AC025171.4-201ENST00000607250 1047 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC116165.3-201ENST00000614524 400 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 AL356752.1-201ENST00000615844 593 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC008115.4-201ENST00000619780 775 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 uc_338.37-201ENST00000620113 186 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC073862.4-201ENST00000622982 854 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AL512506.2-201ENST00000624472 458 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC079416.3-201ENST00000624479 549 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 AC083865.1-201ENST00000636634 831 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.95□□□□□ -1.3
COL6A2P12110 AL929601.4-201ENST00000613011 1341 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL6A2P12110 AC005261.2-201ENST00000593427 4258 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.95□□□□□ -1.3
COL6A2P12110 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL6A2P12110 MTND4P8-201ENST00000514997 1362 ntBASIC6.95□□□□□ -1.3
COL6A2P12110 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms