Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TPM1P09493 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.98□□□□□ -1.29
TPM1P09493 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
TPM1P09493 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 AC092692.1-201ENST00000623625 2595 ntBASIC6.97□□□□□ -1.29
TPM1P09493 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TPM1P09493 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TPM1P09493 RNA5SP355-201ENST00000365317 135 ntBASIC6.97□□□□□ -1.29
TPM1P09493 RNU11-6P-201ENST00000391127 133 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AL391419.1-201ENST00000398901 1275 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AL079341.1-201ENST00000404701 1207 ntBASIC6.97□□□□□ -1.29
TPM1P09493 MRPS21P5-201ENST00000417885 231 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM1P09493 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 RN7SKP242-201ENST00000515967 289 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM1P09493 COX6B1P4-201ENST00000519826 484 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM1P09493 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.97□□□□□ -1.29
TPM1P09493 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM1P09493 AC005725.1-201ENST00000577346 2607 ntBASIC6.97□□□□□ -1.29
TPM1P09493 MIR4685-201ENST00000578185 69 ntBASIC6.97□□□□□ -1.29
TPM1P09493 MIR3187-201ENST00000583431 70 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AC090616.1-201ENST00000583895 447 ntBASIC6.97□□□□□ -1.29
TPM1P09493 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM1P09493 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.97□□□□□ -1.29
TPM1P09493 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 AL355480.4-201ENST00000626823 69 ntBASIC6.97□□□□□ -1.29
TPM1P09493 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 AC073488.9-201ENST00000631601 754 ntBASIC6.97□□□□□ -1.29
TPM1P09493 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM1P09493 NLRP3P1-201ENST00000622303 1785 ntBASIC6.97□□□□□ -1.29
TPM1P09493 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM1P09493 CCNT2P1-201ENST00000423082 1315 ntBASIC6.97□□□□□ -1.29
TPM1P09493 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
TPM1P09493 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.96□□□□□ -1.29
TPM1P09493 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
TPM1P09493 AC232271.1-201ENST00000602455 2715 ntBASIC6.96□□□□□ -1.29
TPM1P09493 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TPM1P09493 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
TPM1P09493 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 RN7SKP186-201ENST00000365371 303 ntBASIC6.96□□□□□ -1.3
TPM1P09493 MIR187-201ENST00000385062 109 ntBASIC6.96□□□□□ -1.3
TPM1P09493 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
TPM1P09493 RN7SKP17-201ENST00000411242 351 ntBASIC6.96□□□□□ -1.3
TPM1P09493 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM1P09493 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
TPM1P09493 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM1P09493 VPS25P1-201ENST00000455691 508 ntBASIC6.96□□□□□ -1.3
TPM1P09493 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
TPM1P09493 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.96□□□□□ -1.3
TPM1P09493 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.96□□□□□ -1.3
TPM1P09493 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM1P09493 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM1P09493 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM1P09493 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM1P09493 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.96□□□□□ -1.3
TPM1P09493 AC019257.2-201ENST00000605539 497 ntBASIC6.96□□□□□ -1.3
TPM1P09493 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM1P09493 MIR6085-201ENST00000618314 110 ntBASIC6.96□□□□□ -1.3
TPM1P09493 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM1P09493 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM1P09493 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM1P09493 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
TPM1P09493 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.95□□□□□ -1.3
TPM1P09493 RNA5SP152-201ENST00000365184 110 ntBASIC6.95□□□□□ -1.3
TPM1P09493 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.95□□□□□ -1.3
TPM1P09493 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
TPM1P09493 RNA5SP35-201ENST00000391257 129 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AC226101.1-201ENST00000401483 387 ntBASIC6.95□□□□□ -1.3
TPM1P09493 RANP6-201ENST00000413691 644 ntBASIC6.95□□□□□ -1.3
TPM1P09493 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.95□□□□□ -1.3
TPM1P09493 AC016027.5-201ENST00000427227 210 ntBASIC6.95□□□□□ -1.3
TPM1P09493 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms