Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL663061.1-201ENST00000416625 580 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 AL161742.1-201ENST00000418154 584 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.07□□□□□ -1.12
HMGB1P09429 AL138479.1-201ENST00000426913 484 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC239800.1-201ENST00000442049 719 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.07□□□□□ -1.12
HMGB1P09429 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC8.07□□□□□ -1.12
HMGB1P09429 MTCYBP44-201ENST00000514835 823 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC079298.2-201ENST00000623885 459 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.07□□□□□ -1.12
HMGB1P09429 AL596275.2-208ENST00000641192 594 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
HMGB1P09429 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.07□□□□□ -1.12
HMGB1P09429 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 AC126474.2-201ENST00000623268 1750 ntBASIC8.07□□□□□ -1.12
HMGB1P09429 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.07□□□□□ -1.12
HMGB1P09429 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HMGB1P09429 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.07□□□□□ -1.12
HMGB1P09429 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 TATDN2P3-201ENST00000452855 3665 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 RNA5SP302-201ENST00000364896 100 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.06□□□□□ -1.12
HMGB1P09429 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HMGB1P09429 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 CYCSP17-201ENST00000407870 315 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 MICG-208ENST00000416822 132 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 RPA2P2-201ENST00000419698 796 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 OR52S1P-201ENST00000427016 937 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.06□□□□□ -1.12
HMGB1P09429 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 AL513343.1-201ENST00000451818 792 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 IGKV1D-32-201ENST00000517449 318 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC126323.4-201ENST00000566935 234 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AC004232.1-201ENST00000571388 208 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 MIR5095-201ENST00000578844 88 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 MIR4428-201ENST00000584884 73 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.06□□□□□ -1.12
HMGB1P09429 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 AL162233.1-201ENST00000620014 944 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AC073862.4-201ENST00000622982 854 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 AC004808.2-201ENST00000627965 773 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 MAPK10-365ENST00000641902 3825 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.06□□□□□ -1.12
HMGB1P09429 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC110597.1-201ENST00000562669 3176 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 AC105114.1-201ENST00000624795 1862 ntBASIC8.06□□□□□ -1.12
HMGB1P09429 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
HMGB1P09429 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HMGB1P09429 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HMGB1P09429 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.05□□□□□ -1.12
HMGB1P09429 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.05□□□□□ -1.12
HMGB1P09429 OR5M2P-202ENST00000641241 4242 ntBASIC8.05□□□□□ -1.12
HMGB1P09429 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HMGB1P09429 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms