Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 SNORA35.1-201ENST00000458908 128 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC008620.1-201ENST00000468453 592 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL591122.1-201ENST00000487348 492 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC022325.1-201ENST00000502748 2199 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NACAP6-201ENST00000509572 622 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 RNA5SP400-201ENST00000517155 111 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 IGKV1D-22-201ENST00000518953 324 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL162632.2-201ENST00000553933 399 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC011193.2-201ENST00000582638 367 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL589765.5-201ENST00000596133 515 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL049840.5-201ENST00000602827 552 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC005070.1-201ENST00000603744 365 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL034374.2-201ENST00000605281 548 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC004890.3-201ENST00000605566 1095 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL031777.2-201ENST00000611953 196 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL139123.1-201ENST00000612008 430 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC109446.4-201ENST00000623235 2755 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC018692.2-201ENST00000624130 348 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 OR7E91P-202ENST00000642062 1198 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NR1H5P-201ENST00000452683 1377 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 TRIM53CP-201ENST00000531490 1354 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC005005.4-201ENST00000623789 16698 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 ADAM24P-201ENST00000398655 2101 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 IGLV3-4-201ENST00000432300 244 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RPS3AP38-201ENST00000435889 763 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC239800.1-201ENST00000442049 719 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AL353803.3-201ENST00000444641 335 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC092967.1-201ENST00000449016 481 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RPS27AP3-201ENST00000453803 454 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RN7SL216P-201ENST00000471607 298 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC091982.1-202ENST00000473923 343 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 DEFB109A-201ENST00000482450 265 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 NPM1P28-201ENST00000492269 840 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC008945.1-201ENST00000505144 499 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 SNX18P23-201ENST00000510867 677 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC026774.2-201ENST00000513990 1098 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 OR7E161P-201ENST00000533722 967 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LYZ-202ENST00000548839 558 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms