Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
SNX3O60493 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
SNX3O60493 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.15□□□□□ -1.43
SNX3O60493 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SNX3O60493 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNX3O60493 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNX3O60493 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX3O60493 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX3O60493 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 AC004656.1-201ENST00000568479 4951 ntBASIC6.14□□□□□ -1.43
SNX3O60493 AC007998.4-201ENST00000612496 2533 ntBASIC6.14□□□□□ -1.43
SNX3O60493 SNORA35-201ENST00000386104 128 ntBASIC6.14□□□□□ -1.43
SNX3O60493 RNA5SP176-201ENST00000390956 110 ntBASIC6.14□□□□□ -1.43
SNX3O60493 LDHAP5-201ENST00000394996 622 ntBASIC6.14□□□□□ -1.43
SNX3O60493 SNORA81-201ENST00000408493 178 ntBASIC6.14□□□□□ -1.43
SNX3O60493 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 AL158827.1-201ENST00000416300 391 ntBASIC6.14□□□□□ -1.43
SNX3O60493 AC092106.2-201ENST00000436597 487 ntBASIC6.14□□□□□ -1.43
SNX3O60493 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX3O60493 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 RN7SL608P-201ENST00000492377 279 ntBASIC6.14□□□□□ -1.43
SNX3O60493 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX3O60493 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 AC021820.1-201ENST00000525564 808 ntBASIC6.14□□□□□ -1.43
SNX3O60493 SETP17-201ENST00000534163 817 ntBASIC6.14□□□□□ -1.43
SNX3O60493 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.14□□□□□ -1.43
SNX3O60493 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.14□□□□□ -1.43
SNX3O60493 FRG2IP-201ENST00000563581 781 ntBASIC6.14□□□□□ -1.43
SNX3O60493 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 MIR4428-201ENST00000584884 73 ntBASIC6.14□□□□□ -1.43
SNX3O60493 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 AC060780.2-201ENST00000589047 198 ntBASIC6.14□□□□□ -1.43
SNX3O60493 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX3O60493 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 AL161756.3-201ENST00000641216 2071 ntBASIC6.14□□□□□ -1.43
SNX3O60493 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX3O60493 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX3O60493 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX3O60493 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX3O60493 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX3O60493 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX3O60493 AC114774.1-201ENST00000507410 1770 ntBASIC6.13□□□□□ -1.43
SNX3O60493 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX3O60493 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 AC018628.1-201ENST00000624147 3819 ntBASIC6.13□□□□□ -1.43
SNX3O60493 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 AC005224.3-201ENST00000584683 2140 ntBASIC6.13□□□□□ -1.43
SNX3O60493 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 AC016745.2-201ENST00000608834 3443 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX3O60493 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX3O60493 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX3O60493 RNU12-2P-201ENST00000364789 156 ntBASIC6.13□□□□□ -1.43
SNX3O60493 RN7SKP189-201ENST00000365042 330 ntBASIC6.13□□□□□ -1.43
SNX3O60493 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 FDPSP5-201ENST00000399474 1057 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AL590635.1-201ENST00000406314 586 ntBASIC6.13□□□□□ -1.43
SNX3O60493 PPIL1P1-201ENST00000423936 499 ntBASIC6.13□□□□□ -1.43
SNX3O60493 ETF1P1-206ENST00000427296 984 ntBASIC6.13□□□□□ -1.43
SNX3O60493 VDAC2P3-201ENST00000430995 828 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.13□□□□□ -1.43
SNX3O60493 KRT18P53-201ENST00000431919 117 ntBASIC6.13□□□□□ -1.43
SNX3O60493 MED28P4-201ENST00000433137 572 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX3O60493 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX3O60493 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX3O60493 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX3O60493 MTND4LP12-201ENST00000448237 295 ntBASIC6.13□□□□□ -1.43
SNX3O60493 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX3O60493 AL133480.2-201ENST00000456723 487 ntBASIC6.13□□□□□ -1.43
SNX3O60493 RPL7P17-201ENST00000470927 724 ntBASIC6.13□□□□□ -1.43
SNX3O60493 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.13□□□□□ -1.43
SNX3O60493 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX3O60493 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 AC084033.2-201ENST00000551532 967 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX3O60493 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms