Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC104046.1-201ENST00000559487 406 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AP005119.2-201ENST00000579735 1105 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC139085.1-201ENST00000582716 182 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC138761.2-201ENST00000583878 343 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 UBE2V2P2-201ENST00000587677 504 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 MTCO3P22-201ENST00000603219 784 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 LLPHP1-201ENST00000603571 367 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC012557.1-201ENST00000607115 611 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC005021.1-201ENST00000608730 355 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.812-201ENST00000610788 101 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AL139418.1-201ENST00000613613 177 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.784-201ENST00000613803 101 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 MIR8075-201ENST00000614354 80 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC011472.4-201ENST00000615848 491 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.787-201ENST00000616522 101 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.780-201ENST00000617336 101 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.801-201ENST00000619005 101 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC004836.1-201ENST00000623032 634 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 CR381653.2-201ENST00000624041 768 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 MTND4P27-201ENST00000450813 1354 ntBASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CUEDC1Q9NWM3 HERC2P5-201ENST00000562687 3825 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 OR9M1P-202ENST00000641564 3163 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC007126.1-201ENST00000508202 4781 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 OR56A4-201ENST00000330728 1209 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MIR135B-201ENST00000362189 97 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MIR1302-11-201ENST00000408051 138 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MIR1302-9-201ENST00000408365 138 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MIR1302-10-201ENST00000408734 138 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 BTF3P8-201ENST00000414577 526 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 OR4K6P-201ENST00000416478 897 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 BTF3P9-201ENST00000418784 283 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 PGAM1P3-201ENST00000420790 565 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 RBM22P7-201ENST00000421321 280 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC108448.2-201ENST00000431546 730 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC092427.1-201ENST00000439177 601 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AL445686.1-201ENST00000443086 348 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC002366.1-201ENST00000446186 1190 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 CCDC75P1-201ENST00000469247 791 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 MYADML-203ENST00000491596 951 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 ENPP7P3-201ENST00000509123 241 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 RN7SKP190-201ENST00000516079 286 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AP001207.1-201ENST00000524051 481 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AL049830.4-201ENST00000555149 351 ntBASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.94□□□□□ -1.14
CUEDC1Q9NWM3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms