Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL445687.2-201ENST00000458156 728 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 DEFB109A-201ENST00000482450 265 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC107952.1-201ENST00000524200 376 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AP006437.1-202ENST00000530327 933 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC069240.2-201ENST00000550242 609 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 DPPA3P2-202ENST00000557188 1219 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 MRPL57P3-201ENST00000619218 176 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC005753.1-201ENST00000623837 618 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AL035425.4-201ENST00000624509 1063 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AC116667.2-201ENST00000641075 823 ntBASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC28BQ9BUN5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC28BQ9BUN5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RNA5SP453-201ENST00000362503 119 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RNU11-6P-201ENST00000391127 133 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RNU1-56P-201ENST00000391303 164 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL136100.1-201ENST00000407696 330 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RPLP1P10-201ENST00000413972 339 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RPL6P21-201ENST00000418672 846 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC117434.1-201ENST00000419971 836 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 BX276092.6-201ENST00000430476 250 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL365220.1-201ENST00000432923 399 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC083855.1-201ENST00000440041 258 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC027124.1-201ENST00000440852 466 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 GAPDHP33-201ENST00000443168 1013 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 BX276092.8-201ENST00000455722 250 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC018475.1-201ENST00000478358 465 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RPL7AP30-201ENST00000482859 796 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AL035690.1-201ENST00000490892 383 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC010442.1-201ENST00000515583 816 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 PDCL3P1-201ENST00000534575 734 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC009120.3-201ENST00000563335 499 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 MIR3189-201ENST00000578735 73 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 MIR5682-201ENST00000584864 76 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC090241.1-201ENST00000587732 621 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 OR7A8P-201ENST00000595427 913 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC245052.7-201ENST00000601161 359 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 UGT2B24P-201ENST00000514441 1597 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 PSMC1P4-201ENST00000515236 1327 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 SAGE3P-201ENST00000619800 1635 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 AC140479.2-201ENST00000421567 3130 ntBASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CCDC28BQ9BUN5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms