Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC064862.5-201ENST00000440618 334 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AL031681.1-201ENST00000443304 400 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 CEACAMP11-201ENST00000455211 583 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC093664.1-201ENST00000511779 289 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC025423.2-201ENST00000537570 439 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 CYCSP1-201ENST00000604815 315 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC117490.2-201ENST00000610042 594 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AP005131.7-201ENST00000610087 611 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AP000577.1-201ENST00000624366 878 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC096992.2-201ENST00000609553 1684 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC022613.3-201ENST00000560740 1346 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 PABPC1P8-201ENST00000452851 2086 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 RN7SKP184-201ENST00000362348 333 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 RNA5SP474-201ENST00000391234 90 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 RN7SKP188-201ENST00000410789 317 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 SPATA20P1-201ENST00000423089 438 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 MTATP6P11-201ENST00000428071 670 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 RPS10P21-201ENST00000430654 475 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC083906.1-201ENST00000509298 406 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 COL6A4P2-205ENST00000509855 506 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 SNORA70.17-201ENST00000516449 133 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 SNRPCP6-201ENST00000528310 210 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC020915.5-201ENST00000596836 964 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC096586.2-201ENST00000610260 441 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC009779.8-201ENST00000641684 4384 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 AC022417.1-201ENST00000624768 1303 ntBASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CHMP4CQ96CF2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 RNU6-819P-201ENST00000364116 107 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AL049697.3-201ENST00000406493 982 ntBASIC7.92□□□□□ -1.14
CHMP4CQ96CF2 AC096632.2-201ENST00000438139 1239 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms