Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHA9Q7RTU4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 RNU2-18P-201ENST00000411224 162 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 MORF4-201ENST00000447135 971 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 RPL12P7-201ENST00000493832 494 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 OR7E99P-201ENST00000505750 922 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AL357094.1-201ENST00000603845 844 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC124916.2-201ENST00000604416 224 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC087821.1-201ENST00000623639 567 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AL357140.4-201ENST00000636827 412 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 AC006213.6-201ENST00000623722 4179 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
BHLHA9Q7RTU4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RNA5SP350-201ENST00000363298 111 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RNU1-65P-201ENST00000363919 148 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RN7SKP187-201ENST00000365536 330 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AL445238.1-204ENST00000400311 463 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RNA5SP431-201ENST00000410312 120 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 UBE2V1P14-201ENST00000415815 558 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 SUMO2P10-201ENST00000452006 288 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RPS27AP3-201ENST00000453803 454 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RPL34P33-201ENST00000486062 334 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RPL12P30-201ENST00000488389 499 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC021006.1-201ENST00000489849 553 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 MTND6P8-201ENST00000503471 522 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 BCAS2P1-201ENST00000528022 632 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 MIR3154-201ENST00000577829 84 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC090953.1-201ENST00000604305 1092 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC022106.1-201ENST00000612834 766 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AL391262.1-201ENST00000556558 1992 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AC011504.1-201ENST00000623331 4103 ntBASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BHLHA9Q7RTU4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms