Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 AL157884.1-201ENST00000424561 454 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AL354707.3-201ENST00000427308 331 ntBASIC4.38□□□□□ -1.71
RPL39P62891 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RPL39P62891 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 PUDPP2-201ENST00000431423 643 ntBASIC4.38□□□□□ -1.71
RPL39P62891 IGLV3-4-201ENST00000432300 244 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.38□□□□□ -1.71
RPL39P62891 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 RPS3AP38-201ENST00000435889 763 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AC083855.1-201ENST00000440041 258 ntBASIC4.38□□□□□ -1.71
RPL39P62891 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 RPL5P10-201ENST00000445207 894 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 PRELID1P3-201ENST00000450055 643 ntBASIC4.38□□□□□ -1.71
RPL39P62891 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 CBX5P1-201ENST00000468470 561 ntBASIC4.38□□□□□ -1.71
RPL39P62891 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.38□□□□□ -1.71
RPL39P62891 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.38□□□□□ -1.71
RPL39P62891 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 HNRNPCP8-201ENST00000528764 888 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.38□□□□□ -1.71
RPL39P62891 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.38□□□□□ -1.71
RPL39P62891 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 AC024451.4-201ENST00000602578 752 ntBASIC4.38□□□□□ -1.71
RPL39P62891 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 AC027559.1-201ENST00000636288 271 ntBASIC4.38□□□□□ -1.71
RPL39P62891 MAPK10-350ENST00000641777 965 ntBASIC4.38□□□□□ -1.71
RPL39P62891 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
RPL39P62891 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 ZNF969P-201ENST00000510345 2341 ntBASIC4.38□□□□□ -1.71
RPL39P62891 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.38□□□□□ -1.71
RPL39P62891 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 AC126474.2-201ENST00000623268 1750 ntBASIC4.37□□□□□ -1.71
RPL39P62891 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RPL39P62891 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 AC004014.2-201ENST00000623718 5122 ntBASIC4.37□□□□□ -1.71
RPL39P62891 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 OFD1P17-201ENST00000437639 3018 ntBASIC4.37□□□□□ -1.71
RPL39P62891 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 SNORD16-201ENST00000362803 99 ntBASIC4.37□□□□□ -1.71
RPL39P62891 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RPL39P62891 U3.52-201ENST00000384034 216 ntBASIC4.37□□□□□ -1.71
RPL39P62891 RNU1-56P-201ENST00000391303 164 ntBASIC4.37□□□□□ -1.71
RPL39P62891 NHP2P2-201ENST00000396362 460 ntBASIC4.37□□□□□ -1.71
RPL39P62891 RPLP1P10-201ENST00000413972 339 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.37□□□□□ -1.71
RPL39P62891 MTND1P10-201ENST00000426108 832 ntBASIC4.37□□□□□ -1.71
RPL39P62891 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.37□□□□□ -1.71
RPL39P62891 USP24P1-201ENST00000433802 779 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 AC009963.4-201ENST00000448535 339 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.37□□□□□ -1.71
RPL39P62891 RPS12P20-201ENST00000464109 380 ntBASIC4.37□□□□□ -1.71
RPL39P62891 RN7SL223P-201ENST00000470401 294 ntBASIC4.37□□□□□ -1.71
RPL39P62891 UOX-201ENST00000471089 899 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AC025271.1-201ENST00000485045 429 ntBASIC4.37□□□□□ -1.71
RPL39P62891 PDPN-205ENST00000487038 607 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 AC093815.1-201ENST00000508637 280 ntBASIC4.37□□□□□ -1.71
RPL39P62891 CYP4F27P-201ENST00000514557 494 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.37□□□□□ -1.71
RPL39P62891 RPA2P3-201ENST00000533268 770 ntBASIC4.37□□□□□ -1.71
RPL39P62891 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.37□□□□□ -1.71
RPL39P62891 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.37□□□□□ -1.71
RPL39P62891 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC4.37□□□□□ -1.71
RPL39P62891 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms