Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC016745.2-201ENST00000608834 3443 ntBASIC6.93□□□□□ -1.3
SSR1P43307 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSR1P43307 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 RNA5SP279-201ENST00000365513 117 ntBASIC6.93□□□□□ -1.3
SSR1P43307 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
SSR1P43307 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 AL445213.1-201ENST00000412589 747 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AL139135.1-201ENST00000412675 209 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 ELOBP4-201ENST00000423418 296 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC009303.1-201ENST00000426307 352 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AL138479.1-201ENST00000426913 484 ntBASIC6.93□□□□□ -1.3
SSR1P43307 BMP6P1-201ENST00000431230 679 ntBASIC6.93□□□□□ -1.3
SSR1P43307 GAPDHP20-201ENST00000444107 1007 ntBASIC6.93□□□□□ -1.3
SSR1P43307 RPS7P4-201ENST00000444127 582 ntBASIC6.93□□□□□ -1.3
SSR1P43307 RPL26P30-201ENST00000453533 435 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.93□□□□□ -1.3
SSR1P43307 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.93□□□□□ -1.3
SSR1P43307 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.93□□□□□ -1.3
SSR1P43307 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 AC103855.4-201ENST00000533158 265 ntBASIC6.93□□□□□ -1.3
SSR1P43307 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSR1P43307 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 AL109628.1-201ENST00000556877 366 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC106785.4-201ENST00000569492 412 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.93□□□□□ -1.3
SSR1P43307 AL078623.1-201ENST00000602702 907 ntBASIC6.93□□□□□ -1.3
SSR1P43307 DIMT1P1-201ENST00000603970 763 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC005277.2-201ENST00000617898 390 ntBASIC6.93□□□□□ -1.3
SSR1P43307 MRPL57P1-201ENST00000621486 265 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AC127071.2-201ENST00000623293 527 ntBASIC6.93□□□□□ -1.3
SSR1P43307 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.93□□□□□ -1.3
SSR1P43307 AC092701.1-201ENST00000623627 1551 ntBASIC6.93□□□□□ -1.3
SSR1P43307 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.93□□□□□ -1.3
SSR1P43307 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 AC015799.1-201ENST00000622996 3122 ntBASIC6.93□□□□□ -1.3
SSR1P43307 AP005432.1-201ENST00000580891 3485 ntBASIC6.93□□□□□ -1.3
SSR1P43307 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.93□□□□□ -1.3
SSR1P43307 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SSR1P43307 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSR1P43307 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.93□□□□□ -1.3
SSR1P43307 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.92□□□□□ -1.3
SSR1P43307 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.92□□□□□ -1.3
SSR1P43307 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 AC010266.2-201ENST00000564741 3255 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AC095038.1-201ENST00000429248 1591 ntBASIC6.92□□□□□ -1.3
SSR1P43307 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.92□□□□□ -1.3
SSR1P43307 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.92□□□□□ -1.3
SSR1P43307 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSR1P43307 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSR1P43307 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSR1P43307 RNA5SP355-201ENST00000365317 135 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSR1P43307 RPL3P11-201ENST00000434028 1146 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.92□□□□□ -1.3
SSR1P43307 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSR1P43307 UOX-201ENST00000471089 899 ntBASIC6.92□□□□□ -1.3
SSR1P43307 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 AL390198.2-201ENST00000510553 222 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AC096661.1-201ENST00000515870 822 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 AC090241.1-201ENST00000587732 621 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 AL157899.1-201ENST00000604110 936 ntBASIC6.92□□□□□ -1.3
SSR1P43307 MIR8082-201ENST00000612488 81 ntBASIC6.92□□□□□ -1.3
SSR1P43307 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SSR1P43307 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms