Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 UGT2B27P-201ENST00000505092 1620 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGA1P17096 CYP2G2P-201ENST00000594920 1485 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HMGA1P17096 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGA1P17096 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 RNA5SP350-201ENST00000363298 111 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGA1P17096 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 ATP5LP2-201ENST00000440646 311 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 VN1R38P-201ENST00000450265 887 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 AC002553.3-201ENST00000453002 341 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGA1P17096 SNX18P26-201ENST00000458433 740 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGA1P17096 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 AC025458.1-201ENST00000506046 166 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 AC090958.1-201ENST00000511122 351 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGA1P17096 Y_RNA.710-201ENST00000516975 110 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 RNA5SP340-201ENST00000517132 107 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGA1P17096 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGA1P17096 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGA1P17096 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGA1P17096 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGA1P17096 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.53□□□□□ -1.36
HMGA1P17096 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGA1P17096 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGA1P17096 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGA1P17096 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
HMGA1P17096 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGA1P17096 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
HMGA1P17096 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 AP002370.1-201ENST00000528055 1602 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGA1P17096 LYPLA1P3-201ENST00000402650 695 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 AC097721.1-201ENST00000427150 1253 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 OR3D1P-201ENST00000438288 955 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGA1P17096 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGA1P17096 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGA1P17096 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGA1P17096 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGA1P17096 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 AC006924.1-201ENST00000610750 559 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 AC024255.1-201ENST00000614376 102 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 AC012254.5-201ENST00000623573 478 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 AP001962.1-201ENST00000624114 559 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGA1P17096 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 AC092821.3-202ENST00000641304 2767 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGA1P17096 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HMGA1P17096 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGA1P17096 TNPO1P2-201ENST00000426249 2665 ntBASIC6.52□□□□□ -1.37
HMGA1P17096 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms