Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC5.89□□□□□ -1.47
SPTA1P02549 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SPTA1P02549 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 IGKV1OR2-3-201ENST00000411475 288 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 SRSF1P1-201ENST00000424058 520 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AC130360.1-201ENST00000425489 1117 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC011352.2-201ENST00000514574 1016 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AC130365.2-201ENST00000525882 1201 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 AF230666.2-201ENST00000602328 725 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 RNF138P2-201ENST00000603490 592 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AC092681.3-201ENST00000609463 678 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC073488.2-201ENST00000631903 751 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.88□□□□□ -1.47
SPTA1P02549 AP003175.1-201ENST00000641383 6658 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SPTA1P02549 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SPTA1P02549 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.88□□□□□ -1.47
SPTA1P02549 AC007537.2-201ENST00000472093 511 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 COPS8P2-201ENST00000473228 627 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 RN7SL826P-201ENST00000479724 288 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.88□□□□□ -1.47
SPTA1P02549 OR5H7P-201ENST00000514084 930 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 RNA5SP228-201ENST00000516232 133 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SPTA1P02549 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 AP000577.1-201ENST00000624366 878 ntBASIC5.88□□□□□ -1.47
SPTA1P02549 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SPTA1P02549 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.88□□□□□ -1.47
SPTA1P02549 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 RPL31P11-201ENST00000426558 1558 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC5.87□□□□□ -1.47
SPTA1P02549 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SPTA1P02549 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 FAR2P2-201ENST00000413041 594 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 RPL23AP85-201ENST00000421838 433 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.87□□□□□ -1.47
SPTA1P02549 FAR2P4-202ENST00000425399 584 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 CXCR2P1-202ENST00000443392 1074 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 SPRYD7P1-201ENST00000443861 570 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 FAR2P1-206ENST00000449736 709 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.87□□□□□ -1.47
SPTA1P02549 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC5.87□□□□□ -1.47
SPTA1P02549 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.87□□□□□ -1.47
SPTA1P02549 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 AC068768.2-201ENST00000602352 343 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AC073333.2-201ENST00000603589 769 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SPTA1P02549 AC005393.1-201ENST00000617916 584 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AL390882.1-201ENST00000618821 594 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.87□□□□□ -1.47
SPTA1P02549 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms