Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX4O60224 OR51P1P-201ENST00000447547 942 ntBASIC5.97□□□□□ -1.45
SSX4O60224 MTCYBP14-201ENST00000457471 715 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 OR9A1P-202ENST00000484361 945 ntBASIC5.97□□□□□ -1.45
SSX4O60224 SNORA58-201ENST00000505219 137 ntBASIC5.97□□□□□ -1.45
SSX4O60224 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX4O60224 MINOS1P4-201ENST00000515470 318 ntBASIC5.97□□□□□ -1.45
SSX4O60224 SCARNA6-201ENST00000515982 265 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 OR5D2P-201ENST00000524390 911 ntBASIC5.97□□□□□ -1.45
SSX4O60224 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 AL132640.1-201ENST00000559594 619 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 AL713998.2-201ENST00000604538 1198 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL390877.1-201ENST00000605704 214 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL133406.3-201ENST00000606817 541 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL354718.1-201ENST00000619764 589 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC211486.4-201ENST00000621495 113 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
SSX4O60224 AC005858.3-201ENST00000624756 589 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL049541.2-201ENST00000626377 555 ntBASIC5.97□□□□□ -1.45
SSX4O60224 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SSX4O60224 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SSX4O60224 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SSX4O60224 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SSX4O60224 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SSX4O60224 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SSX4O60224 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.96□□□□□ -1.45
SSX4O60224 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSX4O60224 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.96□□□□□ -1.45
SSX4O60224 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX4O60224 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 RNA5SP152-201ENST00000365184 110 ntBASIC5.96□□□□□ -1.46
SSX4O60224 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SSX4O60224 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 AL079341.1-201ENST00000404701 1207 ntBASIC5.96□□□□□ -1.46
SSX4O60224 RN7SKP254-201ENST00000410685 310 ntBASIC5.96□□□□□ -1.46
SSX4O60224 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 RPLP1P10-201ENST00000413972 339 ntBASIC5.96□□□□□ -1.46
SSX4O60224 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 PTPN2P1-201ENST00000423212 1072 ntBASIC5.96□□□□□ -1.46
SSX4O60224 UQCRHP1-204ENST00000424609 274 ntBASIC5.96□□□□□ -1.46
SSX4O60224 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX4O60224 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX4O60224 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX4O60224 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.96□□□□□ -1.46
SSX4O60224 AC004890.1-201ENST00000461005 181 ntBASIC5.96□□□□□ -1.46
SSX4O60224 RN7SL165P-201ENST00000477476 291 ntBASIC5.96□□□□□ -1.46
SSX4O60224 RPS7P11-201ENST00000484240 586 ntBASIC5.96□□□□□ -1.46
SSX4O60224 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX4O60224 RNU6-362P-201ENST00000516736 90 ntBASIC5.96□□□□□ -1.46
SSX4O60224 AP005902.2-201ENST00000518393 307 ntBASIC5.96□□□□□ -1.46
SSX4O60224 AC026616.1-201ENST00000523157 525 ntBASIC5.96□□□□□ -1.46
SSX4O60224 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.96□□□□□ -1.46
SSX4O60224 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX4O60224 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX4O60224 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX4O60224 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX4O60224 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms