Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 FDPSP5-201ENST00000399474 1057 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SKP205-201ENST00000410999 307 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 SPATA20P1-201ENST00000423089 438 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AL139415.1-201ENST00000424862 352 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC093325.1-201ENST00000508378 326 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC008429.2-201ENST00000523057 864 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 OR52K3P-201ENST00000531655 943 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 NIFKP4-201ENST00000567275 1192 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SL32P-201ENST00000580514 281 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 RPL7AP69-201ENST00000595306 806 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AL157899.1-201ENST00000604110 936 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC097467.4-201ENST00000605504 141 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC016590.3-201ENST00000611171 753 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 MIR6883-201ENST00000614952 78 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC009120.7-201ENST00000623452 780 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC005514.1-201ENST00000623521 208 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC027559.1-201ENST00000636288 271 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC010132.4-201ENST00000569883 1368 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 AC004023.1-201ENST00000561473 1744 ntBASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 DNM1P47-203ENST00000571780 12667 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 WDR95P-201ENST00000425638 1542 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC137056.2-201ENST00000624055 1958 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC010894.1-201ENST00000313760 361 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC026310.1-201ENST00000396004 378 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL050335.1-201ENST00000396909 869 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL353133.1-201ENST00000407695 401 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL023284.3-201ENST00000407767 334 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CDC42P6-201ENST00000421246 576 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL589794.1-201ENST00000424971 390 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AP003385.1-201ENST00000426387 893 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL596268.1-201ENST00000427910 1048 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 VN1R53P-201ENST00000429536 957 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC003989.1-201ENST00000434569 565 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 BX679664.2-201ENST00000439282 283 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 GAPDHP33-201ENST00000443168 1013 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 MGAT2P1-201ENST00000449718 797 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 RPS3AP49-201ENST00000472161 790 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 RN7SL70P-201ENST00000478322 302 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC122714.1-201ENST00000502510 459 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC005519.1-201ENST00000554490 601 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 CHEK2P2-201ENST00000554701 672 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC068408.1-201ENST00000577406 1144 ntBASIC4.88□□□□□ -1.63
HLA-DRB4X5D2U9 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms