Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC002044.3-201ENST00000623314 541 ntBASIC6.65□□□□□ -1.34
PCDH9Q9HC56 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDH9Q9HC56 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.65□□□□□ -1.35
PCDH9Q9HC56 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
PCDH9Q9HC56 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDH9Q9HC56 XKRY2-202ENST00000623874 1581 ntBASIC6.65□□□□□ -1.35
PCDH9Q9HC56 XKRY-202ENST00000624960 1581 ntBASIC6.65□□□□□ -1.35
PCDH9Q9HC56 AC068769.1-201ENST00000474767 2426 ntBASIC6.65□□□□□ -1.35
PCDH9Q9HC56 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.65□□□□□ -1.35
PCDH9Q9HC56 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.65□□□□□ -1.35
PCDH9Q9HC56 AL355377.1-201ENST00000621125 1653 ntBASIC6.65□□□□□ -1.35
PCDH9Q9HC56 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 U3.52-201ENST00000384034 216 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 RNU4-64P-201ENST00000410795 131 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 CYP4F30P-202ENST00000420048 405 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 OR6C71P-201ENST00000432580 913 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC092106.2-201ENST00000436597 487 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AL034369.1-201ENST00000453808 477 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AP003385.3-201ENST00000472498 287 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 RN7SL502P-201ENST00000481857 290 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC113191.1-201ENST00000517759 403 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 IGKV1D-22-201ENST00000518953 324 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 OR7A8P-201ENST00000595427 913 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AC079248.1-201ENST00000427568 1546 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 HSPD1P8-201ENST00000400121 1658 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 AP001157.1-201ENST00000550837 2339 ntBASIC6.64□□□□□ -1.35
PCDH9Q9HC56 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDH9Q9HC56 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL451142.1-201ENST00000375867 775 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 SNORD94-201ENST00000386037 137 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL451046.1-201ENST00000406097 534 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RPS17P17-201ENST00000419392 409 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RBMY2AP-201ENST00000445405 1157 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RBMY2CP-201ENST00000448575 1157 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RBMY2DP-202ENST00000448881 1157 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 CCNJP1-201ENST00000450600 1149 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 CUBNP3-201ENST00000457461 1784 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 RPS2P45-201ENST00000469997 2057 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 OR9G2P-201ENST00000533326 880 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC026956.1-201ENST00000558741 396 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms