Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 MRPS21P5-201ENST00000417885 231 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC244453.4-201ENST00000419150 388 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL355355.1-201ENST00000442900 793 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 RN7SL83P-201ENST00000468131 297 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC093664.1-201ENST00000511779 289 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 MINOS1P4-201ENST00000515470 318 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 RN7SL475P-201ENST00000583379 298 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC090616.1-201ENST00000583895 447 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 RPL7AP69-201ENST00000595306 806 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL133406.3-201ENST00000606817 541 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL008582.1-201ENST00000609612 442 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL354950.1-201ENST00000614150 568 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AC005702.3-201ENST00000585345 1447 ntBASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
ZNF549Q6P9A3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC013268.3-201ENST00000262716 2324 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 CUBNP3-201ENST00000457461 1784 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 RPL31P11-201ENST00000426558 1558 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL353743.3-201ENST00000442109 1468 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL589794.1-201ENST00000424971 390 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 MTND2P39-201ENST00000457230 764 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC018639.1-201ENST00000492994 442 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AP005639.1-201ENST00000526939 192 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL133399.1-201ENST00000527476 298 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 OR9G2P-201ENST00000533326 880 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC092451.2-201ENST00000538746 658 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 CHEK2P2-201ENST00000554701 672 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC068408.1-201ENST00000577406 1144 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC233702.7-202ENST00000582941 211 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC073046.2-201ENST00000604756 527 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 MIR6085-201ENST00000618314 110 ntBASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms