Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.66□□□□□ -1.34
HTTP42858 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.66□□□□□ -1.34
HTTP42858 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 AC114786.1-201ENST00000512892 1415 ntBASIC6.65□□□□□ -1.34
HTTP42858 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.65□□□□□ -1.34
HTTP42858 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HTTP42858 AL356967.1-201ENST00000406305 431 ntBASIC6.65□□□□□ -1.34
HTTP42858 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.65□□□□□ -1.34
HTTP42858 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.65□□□□□ -1.34
HTTP42858 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 RPL7P6-201ENST00000480903 738 ntBASIC6.65□□□□□ -1.34
HTTP42858 AC083795.1-201ENST00000491760 320 ntBASIC6.65□□□□□ -1.34
HTTP42858 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.65□□□□□ -1.34
HTTP42858 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.65□□□□□ -1.34
HTTP42858 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HTTP42858 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.65□□□□□ -1.34
HTTP42858 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.65□□□□□ -1.34
HTTP42858 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.65□□□□□ -1.34
HTTP42858 GYG1P1-201ENST00000460864 698 ntBASIC6.65□□□□□ -1.34
HTTP42858 RN7SL57P-201ENST00000493687 290 ntBASIC6.65□□□□□ -1.34
HTTP42858 AC091965.3-201ENST00000506236 208 ntBASIC6.65□□□□□ -1.34
HTTP42858 HMGB1P42-201ENST00000532126 553 ntBASIC6.65□□□□□ -1.34
HTTP42858 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.65□□□□□ -1.34
HTTP42858 AC087783.2-201ENST00000605070 562 ntBASIC6.65□□□□□ -1.34
HTTP42858 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
HTTP42858 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HTTP42858 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.65□□□□□ -1.35
HTTP42858 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.65□□□□□ -1.35
HTTP42858 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
HTTP42858 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HTTP42858 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HTTP42858 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HTTP42858 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.65□□□□□ -1.35
HTTP42858 AC009963.2-201ENST00000453431 138 ntBASIC6.65□□□□□ -1.35
HTTP42858 AC092824.1-201ENST00000483524 576 ntBASIC6.65□□□□□ -1.35
HTTP42858 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.65□□□□□ -1.35
HTTP42858 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.65□□□□□ -1.35
HTTP42858 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.65□□□□□ -1.35
HTTP42858 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.65□□□□□ -1.35
HTTP42858 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.65□□□□□ -1.35
HTTP42858 AC010245.2-201ENST00000606908 1167 ntBASIC6.65□□□□□ -1.35
HTTP42858 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
HTTP42858 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HTTP42858 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
HTTP42858 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 FO393409.1-201ENST00000399325 1372 ntBASIC6.64□□□□□ -1.35
HTTP42858 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 AC009804.1-201ENST00000400949 179 ntBASIC6.64□□□□□ -1.35
HTTP42858 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.64□□□□□ -1.35
HTTP42858 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.64□□□□□ -1.35
HTTP42858 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HTTP42858 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.64□□□□□ -1.35
HTTP42858 MAPK10-261ENST00000641050 3109 ntBASIC6.64□□□□□ -1.35
HTTP42858 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 BIN2P1-201ENST00000504996 1530 ntBASIC6.64□□□□□ -1.35
HTTP42858 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.64□□□□□ -1.35
HTTP42858 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.64□□□□□ -1.35
HTTP42858 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HTTP42858 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HTTP42858 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.64□□□□□ -1.35
HTTP42858 CEACAMP9-201ENST00000442990 513 ntBASIC6.64□□□□□ -1.35
HTTP42858 AL389915.2-201ENST00000454576 441 ntBASIC6.64□□□□□ -1.35
HTTP42858 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.64□□□□□ -1.35
HTTP42858 AP000676.2-201ENST00000529711 301 ntBASIC6.64□□□□□ -1.35
HTTP42858 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.64□□□□□ -1.35
HTTP42858 AC141002.1-201ENST00000607025 279 ntBASIC6.64□□□□□ -1.35
HTTP42858 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 284.8 ms