Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 RNA5SP188-201ENST00000362916 129 ntBASIC5.89□□□□□ -1.47
SHC1P29353 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 AC097721.1-201ENST00000427150 1253 ntBASIC5.89□□□□□ -1.47
SHC1P29353 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 BMP6P1-201ENST00000431230 679 ntBASIC5.89□□□□□ -1.47
SHC1P29353 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 H3F3BP1-201ENST00000440551 403 ntBASIC5.89□□□□□ -1.47
SHC1P29353 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 NPM1P27-201ENST00000502784 830 ntBASIC5.89□□□□□ -1.47
SHC1P29353 SUMO2P19-201ENST00000518920 295 ntBASIC5.89□□□□□ -1.47
SHC1P29353 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.89□□□□□ -1.47
SHC1P29353 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.89□□□□□ -1.47
SHC1P29353 AC090115.2-201ENST00000548060 883 ntBASIC5.89□□□□□ -1.47
SHC1P29353 AL162632.2-201ENST00000553933 399 ntBASIC5.89□□□□□ -1.47
SHC1P29353 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.89□□□□□ -1.47
SHC1P29353 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 AL137246.2-201ENST00000613439 662 ntBASIC5.89□□□□□ -1.47
SHC1P29353 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.89□□□□□ -1.47
SHC1P29353 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 MIR6823-201ENST00000622118 61 ntBASIC5.89□□□□□ -1.47
SHC1P29353 AC007603.3-201ENST00000636915 979 ntBASIC5.89□□□□□ -1.47
SHC1P29353 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.89□□□□□ -1.47
SHC1P29353 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 HSPD1P8-201ENST00000400121 1658 ntBASIC5.88□□□□□ -1.47
SHC1P29353 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 RNU1-84P-201ENST00000365447 164 ntBASIC5.88□□□□□ -1.47
SHC1P29353 SNORA64.3-201ENST00000365647 134 ntBASIC5.88□□□□□ -1.47
SHC1P29353 MIR551B-201ENST00000384984 96 ntBASIC5.88□□□□□ -1.47
SHC1P29353 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 RNA5SP115-201ENST00000411160 107 ntBASIC5.88□□□□□ -1.47
SHC1P29353 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 HSPE1P27-201ENST00000430808 296 ntBASIC5.88□□□□□ -1.47
SHC1P29353 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SHC1P29353 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.88□□□□□ -1.47
SHC1P29353 CEACAMP11-201ENST00000455211 583 ntBASIC5.88□□□□□ -1.47
SHC1P29353 RARRES2P3-201ENST00000457739 473 ntBASIC5.88□□□□□ -1.47
SHC1P29353 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 RN7SL413P-201ENST00000482700 297 ntBASIC5.88□□□□□ -1.47
SHC1P29353 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 RN7SL208P-201ENST00000577964 296 ntBASIC5.88□□□□□ -1.47
SHC1P29353 MIR3157-201ENST00000578688 85 ntBASIC5.88□□□□□ -1.47
SHC1P29353 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 AC004805.3-201ENST00000603178 310 ntBASIC5.88□□□□□ -1.47
SHC1P29353 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.88□□□□□ -1.47
SHC1P29353 AC015819.1-201ENST00000613588 663 ntBASIC5.88□□□□□ -1.47
SHC1P29353 U1.41-201ENST00000617626 165 ntBASIC5.88□□□□□ -1.47
SHC1P29353 AP001264.1-201ENST00000620602 703 ntBASIC5.88□□□□□ -1.47
SHC1P29353 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 NEK2P2-201ENST00000438441 1338 ntBASIC5.88□□□□□ -1.47
SHC1P29353 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHC1P29353 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHC1P29353 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.88□□□□□ -1.47
SHC1P29353 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHC1P29353 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHC1P29353 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHC1P29353 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 431.4 ms