Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH3P22223 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH3P22223 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH3P22223 RPL26P30-201ENST00000453533 435 ntBASIC6.46□□□□□ -1.38
CDH3P22223 RPL9P15-201ENST00000491096 532 ntBASIC6.46□□□□□ -1.38
CDH3P22223 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 EIF4EP5-201ENST00000528228 640 ntBASIC6.46□□□□□ -1.38
CDH3P22223 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 AC005519.1-201ENST00000554490 601 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH3P22223 MIR4420-201ENST00000583944 77 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH3P22223 AC091133.5-201ENST00000603088 301 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AC009237.12-201ENST00000604755 742 ntBASIC6.46□□□□□ -1.38
CDH3P22223 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH3P22223 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AC010333.3-201ENST00000615100 402 ntBASIC6.46□□□□□ -1.38
CDH3P22223 MIR7854-201ENST00000620068 65 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AL353684.1-201ENST00000622677 1120 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AP000432.2-201ENST00000624164 2048 ntBASIC6.46□□□□□ -1.38
CDH3P22223 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH3P22223 AC105114.1-201ENST00000624795 1862 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH3P22223 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 AC068769.1-201ENST00000474767 2426 ntBASIC6.46□□□□□ -1.38
CDH3P22223 Z97989.1-201ENST00000531702 2421 ntBASIC6.46□□□□□ -1.38
CDH3P22223 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 OR4G1P-202ENST00000641173 1788 ntBASIC6.45□□□□□ -1.38
CDH3P22223 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 SNORA38B-201ENST00000363524 131 ntBASIC6.45□□□□□ -1.38
CDH3P22223 RNA5SP140-201ENST00000364524 92 ntBASIC6.45□□□□□ -1.38
CDH3P22223 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH3P22223 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 AL590399.4-201ENST00000436561 601 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC096632.2-201ENST00000438139 1239 ntBASIC6.45□□□□□ -1.38
CDH3P22223 CRYGGP-201ENST00000443337 145 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC092601.1-201ENST00000444526 383 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 AC092349.1-201ENST00000504903 310 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 AC138517.1-201ENST00000515724 568 ntBASIC6.45□□□□□ -1.38
CDH3P22223 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH3P22223 AL591767.3-201ENST00000554632 525 ntBASIC6.45□□□□□ -1.38
CDH3P22223 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 HMGN2P47-201ENST00000559378 272 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.45□□□□□ -1.38
CDH3P22223 RPL29P33-201ENST00000587474 316 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH3P22223 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH3P22223 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 AC015819.1-201ENST00000613588 663 ntBASIC6.45□□□□□ -1.38
CDH3P22223 RAB28P4-201ENST00000622233 665 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC069542.2-201ENST00000624816 216 ntBASIC6.45□□□□□ -1.38
CDH3P22223 AC012078.1-201ENST00000405035 1646 ntBASIC6.45□□□□□ -1.38
CDH3P22223 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 AC007012.2-201ENST00000623206 1676 ntBASIC6.45□□□□□ -1.38
CDH3P22223 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH3P22223 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH3P22223 AC005225.5-201ENST00000623547 2225 ntBASIC6.45□□□□□ -1.38
CDH3P22223 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 RACGAP1P-201ENST00000550663 1879 ntBASIC6.45□□□□□ -1.38
CDH3P22223 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH3P22223 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH3P22223 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH3P22223 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH3P22223 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CDH3P22223 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 SNORA70H-201ENST00000383910 135 ntBASIC6.44□□□□□ -1.38
CDH3P22223 SNORA70J-201ENST00000384182 135 ntBASIC6.44□□□□□ -1.38
CDH3P22223 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms