Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR551B-201ENST00000384984 96 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 ARSFP1-201ENST00000398758 477 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 OSTCP5-201ENST00000425293 453 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 Z83313.1-201ENST00000433780 718 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 USP9YP24-201ENST00000434374 697 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AL356121.1-201ENST00000442911 156 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 USP9YP17-201ENST00000444617 696 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 PTMAP1-205ENST00000455552 325 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 VN1R6P-201ENST00000458417 907 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 SNORD11.1-201ENST00000459482 85 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC005165.2-201ENST00000466070 380 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 RPS4XP6-201ENST00000477670 797 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC074386.1-206ENST00000487102 761 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 AC004223.2-201ENST00000590309 544 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC097376.1-201ENST00000602907 997 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 Z99289.3-201ENST00000605586 594 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC025175.1-201ENST00000606482 759 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 AC005753.1-201ENST00000623837 618 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.34□□□□□ -1.07
ERCC3P19447 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
ERCC3P19447 CTAGE11P-201ENST00000451540 2353 ntBASIC8.34□□□□□ -1.07
ERCC3P19447 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
ERCC3P19447 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ERCC3P19447 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
ERCC3P19447 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.34□□□□□ -1.08
ERCC3P19447 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
ERCC3P19447 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.34□□□□□ -1.08
ERCC3P19447 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.34□□□□□ -1.08
ERCC3P19447 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
ERCC3P19447 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 AL139806.1-201ENST00000403057 1002 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 RN7SKP268-201ENST00000411107 316 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 FTH1P5-201ENST00000425761 545 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AC092648.1-201ENST00000425870 423 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 MTCYBP29-201ENST00000436327 1006 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC8.33□□□□□ -1.08
ERCC3P19447 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 PSMA6P2-201ENST00000457574 686 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC091982.1-202ENST00000473923 343 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ERCC3P19447 ASNSP4-201ENST00000511103 447 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 RN7SKP253-201ENST00000516424 309 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AL031846.1-201ENST00000560933 314 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 ZNF971P-201ENST00000562068 1249 ntBASIC8.33□□□□□ -1.08
ERCC3P19447 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.33□□□□□ -1.08
ERCC3P19447 AC106052.1-201ENST00000608029 497 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms