Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092421.1-201ENST00000448148 418 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 CYCSP44-201ENST00000448560 313 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 GOT2P2-201ENST00000450663 1251 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RPL23AP64-201ENST00000469465 435 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RN7SL518P-201ENST00000491887 280 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 ST13P12-201ENST00000508958 1094 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 OR5M6P-201ENST00000530227 937 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AL121579.2-201ENST00000555466 590 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AP001554.1-201ENST00000604533 376 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC005277.2-201ENST00000617898 390 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC016542.3-201ENST00000623520 619 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AL121768.1-201ENST00000613917 2544 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 DLEU2L-201ENST00000371086 3555 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 PPBPP2-201ENST00000513150 1362 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AL512329.1-201ENST00000404600 1592 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RNA5SP302-201ENST00000364896 100 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 FTH1P26-201ENST00000406512 701 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 SNX18P13-201ENST00000412442 529 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AL158827.1-201ENST00000416300 391 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 NPM1P25-201ENST00000429734 854 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC003989.1-201ENST00000434569 565 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 OR52U1P-201ENST00000439752 923 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RN7SL552P-201ENST00000462094 276 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AL928654.1-201ENST00000476081 354 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC079594.1-201ENST00000489757 331 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RN7SL143P-201ENST00000496780 297 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 CYP4F27P-201ENST00000514557 494 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC006116.6-201ENST00000593258 1103 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC016590.3-201ENST00000611171 753 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 FRG2MP-201ENST00000613317 856 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AC116165.3-201ENST00000614524 400 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RN7SL126P-201ENST00000616400 299 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 AP001264.1-201ENST00000620602 703 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 MRPL57P1-201ENST00000621486 265 ntBASIC4.78□□□□□ -1.64
HLA-DQA1P01909 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms