Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL34P33-201ENST00000486062 334 ntBASIC10.87□□□□□ -0.67
CUX2O14529 HIGD1AP14-201ENST00000507617 282 ntBASIC10.87□□□□□ -0.67
CUX2O14529 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.87□□□□□ -0.67
CUX2O14529 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC10.87□□□□□ -0.67
CUX2O14529 AP001496.3-201ENST00000580230 913 ntBASIC10.87□□□□□ -0.67
CUX2O14529 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC10.87□□□□□ -0.67
CUX2O14529 AC008115.4-201ENST00000619780 775 ntBASIC10.87□□□□□ -0.67
CUX2O14529 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 FBXL21-201ENST00000297158 1305 ntBASIC10.86□□□□□ -0.67
CUX2O14529 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC10.86□□□□□ -0.67
CUX2O14529 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC10.86□□□□□ -0.67
CUX2O14529 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CUX2O14529 RNU1-134P-201ENST00000362935 165 ntBASIC10.86□□□□□ -0.67
CUX2O14529 RN7SKP124-201ENST00000364730 341 ntBASIC10.86□□□□□ -0.67
CUX2O14529 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.86□□□□□ -0.67
CUX2O14529 RN7SL30P-201ENST00000488416 306 ntBASIC10.86□□□□□ -0.67
CUX2O14529 LECT2-203ENST00000512872 762 ntTSL 5 BASIC10.86□□□□□ -0.67
CUX2O14529 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.86□□□□□ -0.67
CUX2O14529 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC10.86□□□□□ -0.67
CUX2O14529 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC10.86□□□□□ -0.67
CUX2O14529 AC096708.4-201ENST00000620563 552 ntBASIC10.86□□□□□ -0.67
CUX2O14529 LINC02019-201ENST00000608605 2060 ntBASIC10.86□□□□□ -0.67
CUX2O14529 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 OR4C1P-202ENST00000641065 1569 ntBASIC10.85□□□□□ -0.67
CUX2O14529 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 AC016397.1-201ENST00000412463 242 ntBASIC10.85□□□□□ -0.67
CUX2O14529 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC10.85□□□□□ -0.67
CUX2O14529 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CUX2O14529 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 VN1R54P-201ENST00000435210 1049 ntBASIC10.85□□□□□ -0.67
CUX2O14529 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC10.85□□□□□ -0.67
CUX2O14529 RPS29P22-201ENST00000472363 168 ntBASIC10.85□□□□□ -0.67
CUX2O14529 RN7SL184P-201ENST00000488308 297 ntBASIC10.85□□□□□ -0.67
CUX2O14529 RN7SL346P-201ENST00000491561 294 ntBASIC10.85□□□□□ -0.67
CUX2O14529 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC10.85□□□□□ -0.67
CUX2O14529 AP000662.1-201ENST00000530952 487 ntBASIC10.85□□□□□ -0.67
CUX2O14529 AP004607.2-201ENST00000533949 322 ntBASIC10.85□□□□□ -0.67
CUX2O14529 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10.85□□□□□ -0.67
CUX2O14529 MIR4505-201ENST00000582238 73 ntBASIC10.85□□□□□ -0.67
CUX2O14529 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC10.85□□□□□ -0.67
CUX2O14529 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC10.85□□□□□ -0.67
CUX2O14529 AL356986.1-201ENST00000604085 341 ntBASIC10.85□□□□□ -0.67
CUX2O14529 AC007204.2-201ENST00000615022 616 ntBASIC10.85□□□□□ -0.67
CUX2O14529 HOTTIP_3.1-201ENST00000619957 337 ntBASIC10.85□□□□□ -0.67
CUX2O14529 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.85□□□□□ -0.67
CUX2O14529 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CUX2O14529 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CUX2O14529 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC10.85□□□□□ -0.67
CUX2O14529 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 AL592429.1-201ENST00000403909 1473 ntBASIC10.84□□□□□ -0.67
CUX2O14529 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 PSG10P-201ENST00000501199 1500 ntBASIC10.84□□□□□ -0.67
CUX2O14529 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 RNA5SP500-201ENST00000364486 119 ntBASIC10.84□□□□□ -0.67
CUX2O14529 ADIG-201ENST00000373348 430 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 RN7SKP121-201ENST00000410842 305 ntBASIC10.84□□□□□ -0.67
CUX2O14529 RN7SKP273-201ENST00000411392 314 ntBASIC10.84□□□□□ -0.67
CUX2O14529 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC10.84□□□□□ -0.67
CUX2O14529 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 AL049840.5-201ENST00000602827 552 ntBASIC10.84□□□□□ -0.67
CUX2O14529 AC120057.5-201ENST00000623840 154 ntBASIC10.84□□□□□ -0.67
CUX2O14529 AC093278.2-201ENST00000564956 2485 ntBASIC10.84□□□□□ -0.67
CUX2O14529 MTHFD1P1-201ENST00000413059 2764 ntBASIC10.84□□□□□ -0.67
CUX2O14529 RBMY1HP-201ENST00000382759 1389 ntBASIC10.84□□□□□ -0.67
CUX2O14529 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC10.84□□□□□ -0.67
CUX2O14529 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CUX2O14529 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC10.83□□□□□ -0.67
CUX2O14529 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC10.83□□□□□ -0.68
CUX2O14529 FLJ42393-201ENST00000623801 2270 ntBASIC10.83□□□□□ -0.68
CUX2O14529 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC10.83□□□□□ -0.68
CUX2O14529 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CUX2O14529 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CUX2O14529 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC10.83□□□□□ -0.68
CUX2O14529 AL606490.1-201ENST00000452266 765 ntBASIC10.83□□□□□ -0.68
CUX2O14529 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC10.83□□□□□ -0.68
CUX2O14529 STARD6-202ENST00000577499 696 ntTSL 2 BASIC10.83□□□□□ -0.68
CUX2O14529 AC091768.1-201ENST00000609258 930 ntBASIC10.83□□□□□ -0.68
CUX2O14529 AL354718.1-201ENST00000619764 589 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms